Awesome Open Source

Programming Languages

Search results for assembly ngs

20 search results found

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

Read Assembly and Annotation Pipeline Tool

A scalable bacterial genome assembly, annotation and analysis pipeline

Hlaminer ⭐ 46

⛏HLA predictions from NGS shotgun data

Scalable long read self-correction and assembly polishing with multiple sequence alignment

TGS scaffolding

Mindthegap ⭐ 30

MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.

Genomic Assemblies Merger for NGS

Plasmidid ⭐ 22

PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.

Haploclique ⭐ 21

Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.

Tracespipe ⭐ 16

Reconstruction and analysis of viral and host genomes at multi-organ level

Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequence assembly.

Nu Ngs01 ⭐ 13

NGS-1 Data analysis course

MIX: Combining multiple assemblies from NGS data

Banzai Microbialgenomics Pipeline ⭐ 10

Banzai is a Microbial Genomics Next Generation Sequencing (NGS) Pipeline Tool developed within Dr Scott Beatson’s Group at the University of Queensland

Viral Assemble ⭐ 8

viral-ngs: genome assembly and scaffolding

Python NGS Repository

Appliedgenomeresearch ⭐ 6

course about NGS data processing: genomics and transcriptomics

Kcri Cge Bap ⭐ 5

KCRI CGE Bacterial Analysis Pipeline

Alignment, Assembly and Genotyping of NGS data

Related Searches

C Sharp Assembly (1,475)

Python Assembly (948)

C Assembly (920)

Video Game Assembly (772)

C Plus Plus Assembly (687)

Assembly Asm (535)

Assembly X86 (532)

Assembly Language (480)

Javascript Assembly (458)

Assembly Genome (449)

1-20 of 20 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.