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Search results for assembly long reads

11 search results found

Nextdenovo ⭐ 306

Fast and accurate de novo assembler for long reads

[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads

SALSA: A tool to scaffold long read assemblies with Hi-C data

Long-reads Gap-free Chromosome-scale Assembler

Close assembly gaps using long-reads at high accuracy.

Scalable long read self-correction and assembly polishing with multiple sequence alignment

A fast tool for hybrid genome assembly of long and short reads

Graph-based assembly phasing

Order and orientation of complete bacterial genomes

Minimizer-based assembly scaffolding and mapping using long reads

Centroflye ⭐ 17

An algorithm for centromere assembly using long error-prone reads

Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.

Project Diploid Assembly ⭐ 8

Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data

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