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Deepbrainseg ⭐ 167

Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks

Brainprep ⭐ 51

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

Bayes Seg ⭐ 30

Java code from the 2008 EMNLP paper "Bayesian Unsupervised Topic Segmentation" by Eisenstein and Barzilay

Multi Atlas Segmentation ⭐ 24

Multi Atlas Segmentation of brain anatomy using ANTs

Macapype ⭐ 19

PNH segmentation pipelines based on nipype

DeepSeg: Deep Neural Network Framework for Automatic Brain Tumor Segmentation using Magnetic Resonance FLAIR Images

Segmentation ⭐ 15

Image segmentation framework in Java (Computer Graphics project at itba.edu.ar)

Hippodeep ⭐ 14

Brain Hippocampus Segmentation

Quantitative MRI toolbox in Python

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