Awesome Open Source

Programming Languages

Search results for alternative splicing

alternative-splicing x

17 search results found

Whippet.jl ⭐ 96

Lightweight and Fast; RNA-seq quantification at the event-level

Altanalyze ⭐ 72

AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.

Discover differential transcript usage from polyA-captured single cell RNA-seq data

BRIE: Bayesian Regression for Isoform Estimate in Single Cells

Psichomics ⭐ 33

Interactive R package to quantify, analyse and visualise alternative splicing

Rnasplice ⭐ 18

rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis

Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)

📓Notebook of Climente-González et al. (2017), The Functional Impact of Alternative Splicing in Cancer.

Efp Seq_browser ⭐ 12

An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictographic" (eFP) based on its RPKM expression level.

ISOform-guided prediction of epiTOPEs in cancer

Vials is a Caleydo Web application for visualizing alternative splicing based on mRNAseq data.

A network-based approach for exon set enrichment

⚔️Find splicing-led, functional changes of the proteome.

Spicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data

Use Thor's Axe to cut exons into their evolutionary building blocks ⚡

Baltica: integrated differential junction usage

Brie Tutorials ⭐ 5

Tutorials for using BRIE

Related Searches

Python Alternative Splicing (13)

Rna Seq Alternative Splicing (9)

R Alternative Splicing (4)

Jupyter Notebook Alternative Splicing (4)

Bioinformatics Alternative Splicing (4)

Pipeline Alternative Splicing (3)

Cancer Alternative Splicing (3)

Transcriptomics Alternative Splicing (3)

Bioinformatics Pipeline Alternative Splicing (3)

1-17 of 17 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.