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3 search results found

Trisicell ⭐ 9

Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data

Aphylogeo ⭐ 7

aPhyloGeo is a multiplatform application for the analysis of genetic and climatic conditions.

SCARLET (Single-cell Algorithm for Reconstructing Loss-supported Evolution of Tumors) is an algorithm that reconstructs tumor phylogenies from single-cell DNA sequencing data. SCARLET uses a loss-supported model that constrains mutation losses based on observed copy-number data.

Scphylo Tools ⭐ 5

a python toolkit for single-cell tumor phylogenetic analysis

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