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Medicaldetectiontoolkit
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1,249
The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
Batchgenerators
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1,013
A framework for data augmentation for 2D and 3D image classification and segmentation
Pytorch Medical Segmentation
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536
This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.
Pymic
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320
Learning To Segment 3d Point Clouds In 2d Image Space
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188
3dmv
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182
[ECCV'18] 3DMV: Joint 3D-Multi-View Prediction for 3D Semantic Scene Segmentation
Elektronn3
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161
A PyTorch-based library for working with 3D and 2D convolutional neural networks, with focus on semantic segmentation of volumetric biomedical image data
3d Mininet
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156
Official Implementation in Pytorch and Tensorflow of 3D-MiniNet: Learning a 2D Representation from Point Clouds for Fast and Efficient 3D LIDAR Semantic Segmentation
Squeeze_and_excitation
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140
PyTorch Implementation of 2D and 3D 'squeeze and excitation' blocks for Fully Convolutional Neural Networks
Acsconv
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138
[IEEE JBHI] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!
Segmentation Driven Pose
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134
Segmentation-driven 6D Object Pose Estimation. CVPR 2019.
Lung Segmentation 2d
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128
Lung fields segmentation on CXR images using convolutional neural networks.
M3d Cam
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119
Medseg
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77
Medical Image Segmentation Toolkit based on PaddlePaddle - 基于paddle的医学影像分割框架
Kits19 Challege
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75
KiTS19——2019 Kidney Tumor Segmentation Challenge
Segcaps
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53
A Clone version from Original SegCaps source code with enhancements on MS COCO dataset.
Ummkd
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43
[TMI'20] Unpaired Multi-modal Segmentation via Knowledge Distillation
Deepfluorolabeling Ipcai2020
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39
Code and data for the "annotation" component of the IPCAI 2020 paper: "Automatic Annotation of Hip Anatomy in Fluoroscopy for Robust and Efficient 2D/3D Registration." https://arxiv.org/abs/1911.07042 or https://doi.org/10.1007/s11548-020-02162-7
Kaggle Dsb
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38
Data Science Bowl 2017 Competition
Uni Em
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35
A unified environment for DNN-based automated segmentation of neuronal EM images
Mvpnet
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34
Implementation of the paper "Multi-view PointNet for 3D Scene Understanding"
Cnn 2d X Ray Catheter Detection
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33
Catheter segmentation in X-Ray fluoroscopy using convolutional neural networks.
Semanticmvs
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31
Semantic 3D Reconstruction with Learning MVS and 2D Segmentation of Aerial Images, Applied Sciences 2021
Unet Lits 2d Pipeline
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30
Liver Lesion Segmentation with 2D Unets
2d Vnet Keras
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27
this is a 2D Vnet model of Keras Version,The architecture of the model is the same as the original 3D Vnet, except that this is a network for 2D image segmentation (the convolution kernel becomes 2D)
Unet
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26
A package to generate and train a UNET deep convolutional network for 2D and 3D image segmentation
Tiler
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26
N-dimensional NumPy array tiling and merging with overlapping, padding and tapering
Segmentation Driven Pose
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25
Reimplementation of segmentation-driven pose, add training code
Gcam
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19
Gcam is an easy to use Pytorch library that makes model predictions more interpretable for humans. It allows the generation of attention maps with multiple methods like Guided Backpropagation, Grad-Cam, Guided Grad-Cam and Grad-Cam++.
Asetsmatlabmaxflow
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17
Matlab implementation of continuous max flow variants
Brain Tumor Segmentation
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16
Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation
Awesome Cv Bibfiles
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16
A collection of bibfiles related to computer vision for efficiency
Tridfusion
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13
TriDFusion (3DF) Medical Imaging Viewer
Segmentermirex2014
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12
Segmentation algorithm for MIREX 2014
Ctsegnet
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12
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
U Net 2d Em Segmentation
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12
using keras, about ISBI Challenge: Segmentation of neuronal structures in EM stacks
Map Alignment Nonrigid Optimization 2d
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10
Nonrigid Optimization of Multimodal 2D Map Alignment
Bayesian_unet
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10
Chainer implementation of Bayesian Convolutional Neural Networks (BCNNs)
Timagetk
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10
3D and 2D Image processing algorithms in Python for tissues
Tissue Segmentation Of Brain Mri Images
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10
Map Alignment 2d
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9
2D Map Alignment With Region Decomposition
Densenet_fcn
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8
A tensorflow implementation of densenet with FCN for medical image segmentation
Brain Tumor Mri Dataset
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8
Utilities to download and load an MRI brain tumor dataset with Python, providing 2D slices, tumor masks and tumor classes.
Segthor19 Using Resu Net
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8
The recent advances in the field of computer vision has led to the wide use of Convolutional Neural Networks (CNNs) in organ segmentation of computed tomography (CT) images. Image guided radiation therapy requires the accurate segmentation of organs at risk (OARs). In this paper, we propose a 2D U-Net network to automatically segment thoracic organs at risk in computed tomography (CT) images. The architecture consists of a down sampling path to capture features and a symmetric up sampling path t
3d 2d Fcn
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8
3D-2D FULLY Convoltional Network For Medical Organ( e.g. Liver) Segmentation
2d Ultrasound Detection And Segmentation
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8
【医学影像分析】2D超声图像的分割检测(Ultrasound Nerve Segmentation | Kaggle数据集)
E2dhipseg
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7
This contains official implementation for Extended 2D Volumetric Consensus Hippocampus Segmentation
Lidar_quadtree_segmentation
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7
Ipn_tensorflow
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7
This is an implementation of "Image Projection Network: 3D to 2D Image Segmentation in OCTA Images". IPN is proposed for 3D to 2D segmentation. Our key insight is to build a projection learning module(PLM) which uses a unidirectional pooling layer to conduct effective features selection and dimension reduction concurrently.By combining multiple PLMs, the proposed network can input 3D data and output 2D segmentation results.
Segmentation Of 2d Brain Mr Images Using Deep Neural Architectures
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7
Image Segmentation using U-Net, U-Net with skip connections and M-Net architectures
Senet_segmentation
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7
Antsy2d
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6
in-browser point cloud annotation tool for instance-level segmentation using 2d projection
Kits19 Cnn
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6
Using convolutional neural networks for the 2019 Kidney and Kidney Tumor Segmentation Challenge
Dag V Net
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6
The code will be made public soon
Vessel Captcha
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5
Image_segmentation
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5
graph based image segmentation for better 2D screw hole recognition
Employing Attention Based Learning For Medical Image Segmentation
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5
Nanomaterial_deeplearning
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5
Semantic neural network to realize pixel-wise classification of 2D nano-material using Matlab
Glib Nature2018 Materials
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5
Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"
Pytorch_bayesian_unet
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5
Migrate to PyTorch. Re-implementation of Bayesian Convolutional Neural Networks (BCNNs)
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