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🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

Alevin Fry ⭐ 115

🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.

Cirrocumulus ⭐ 63

Bring your single-cell data to life

Cite Seq Count ⭐ 50

A tool that allows to get UMI counts from a single cell protein assay

Fastq_utils ⭐ 29

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

The IDK (Industrial Development Kit) library!

Standalone tool and library allowing to work with barcoded linked-reads

🏃 A Monorepo of projects reaching towards EPIC proportions, maintained by one person.

Emoji Picker ⭐ 6

🕺 GUI picker thing for emoji power users

Awesome Linked Reads ⭐ 6

Collection of tools and resources for linked-reads

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