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Search results for snakemake
snakemake
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122 search results found
Spritz
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6
Software for RNA-Seq analysis to create sample-specific proteoform databases from RNA-Seq data
Bactprep
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6
Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)
Salmonscholar
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6
Don't get drowned in the flood of scientific publications. As a salmon, climb up to the stream.
Spras
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6
Signaling Pathway Reconstruction Analysis Streamliner (SPRAS)
Dea_seurat
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6
A Snakemake workflow for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
Uorf Tools
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6
uORF-Tools are a workflow and a collection of tools for the analysis of 'Upstream Open Reading Frames' (short uORFs)
Rnaseq_workflow
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6
snakemake workflow for bulk RNA-seq workflow using STAR-edgeR
Metagenomics
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5
Snakemake workflow for functional analysis of metagenomic WGS read data.
Snakemake Slurm Tutorial
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5
Working example of snakemake tutorial using UAB Cheaha computing cluster via SLURM scheduler
Allmine
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5
AllMine, a flexible pipeline for Allele Mining. Develloped at INRA's GAFL unit :
Nbis Meta
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5
A snakemake workflow for metagenomic projects
Paqr2
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5
Updated version of PAQR, which was previously available in the PAQR_KAPAC joint repository.
Arpeggio
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5
A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.
Bioinformatics_pipeline
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5
Bioinformatics Pipeline
Workflows Snakemake
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5
One-day Snakemake workshop.
Germline_variant_snakemake
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5
Snakemake workflow to call germline variant
Xebec
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5
Snakemake pipeline for microbiome diversity effect size benchmarking
Genome_tracks
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5
A Snakemake workflow for easy visualization of genome browser tracks of aligned BAM files powered by the wrapper gtracks for the package pyGenomeTracks.
Sars2seq
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5
SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.
As_analysis
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5
A complete Snakemake pipeline for detecting allele specific expression
Serpent Methylation Pipeline
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5
An efficient, documented, reproducible Snakemake methylation analysis pipeline for BS-seq and EM-seq samples, including cfDNA.
Celseq2
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5
Generate the UMI count matrix from CEL-Seq2 sequencing data
Related Searches
Python Snakemake (142)
Pipeline Snakemake (68)
101-122 of 122 search results
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