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Search results for slurm

397 search results found

Ansible Simple Slurm Cluster ⭐ 34

A very simple HPC-style cluster with SLURM

Ansible Role Slurm ⭐ 33

For installing and configuring SLURM - Simple Linux Utility for Resource Management

Ansible Slurm Appliance ⭐ 33

A Slurm-based HPC workload management environment, driven by Ansible.

Goslmailer ⭐ 33

GoSlurmMailer - drop in replacement for default slurm MailProg. Delivers slurm job messages to various destinations.

Disbatch ⭐ 31

Tool to distribute a list of computational tasks over a pool of compute resources. The pool can grow or shrink.

Slurm Utils ⭐ 31

A few utilities for use on a SLURM cluster

Usegalaxy Playbook ⭐ 31

Ansible Playbook for usegalaxy.org

Wochenende ⭐ 30

Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3

Awesome Aws Research ⭐ 30

A curated list of awesome Amazon Web Services (AWS) libraries, open source repos, guides, blogs, and other resources for Academic Researchers new to AWS

Joint_vae ⭐ 30

Code to build VAE models that are jointly conditioned.

Teaching Examples ⭐ 30

Examples for use in teaching HPSC workflows, from how to successfully parallelize code, to how to submit that code on an HPC system.

Imagery_utils ⭐ 29

Aws Hpc Recipes ⭐ 29

Contains example recipes that demonstrate how to build HPC systems using AWS services and solutions.

Knowledge Graph ⭐ 29

This is the repository where all the work towards the creation of the TheyBuyForYou knowledge graph will be done

Slurm Https ⭐ 28

A simple HTTPS API for Slurm

Zeldarose ⭐ 27

Train transformer-based models.

Aws Parallelcluster Monitoring ⭐ 27

Monitoring Dashboard for AWS ParallelCluster

Hpc Submission Scripts ⭐ 26

Example job submission scripts for HPC systems (PBS and SLURM)

Covalent Slurm Plugin ⭐ 26

Executor plugin interfacing Covalent with Slurm

Byujobscriptgenerator ⭐ 25

Slurm and PBS batch job script generator

Adaptive Scheduler ⭐ 24

Run many functions (adaptively) on many cores (>10k) using mpi4py.futures, ipyparallel, loky, or dask-mpi. 🎉

Stag Mwc ⭐ 24

StaG Metagenomic Workflow Collaboration

Clusterfutures ⭐ 24

super-slick Slurm and Condor cluster execution for Python

Reproduce.jl ⭐ 24

What were my hyper-parameter settings again?

Example Python Scripts

Paralleltask ⭐ 23

A simple and lightweight parallel task engine

Alvis Intro ⭐ 23

Introduction tutorial and examples for Alvis

TUI for the Slurm Workload Manager

Slurmcommander ⭐ 23

Qhub Hpc ⭐ 22

A unified array job submitter for LSF, SGE/UGE and Slurm

yaspi - Yet Another Slurm Python Interface

Bioinformaticsintroduction ⭐ 22

Scripts to facilitate parallel InSAR processing and analysis of Sentinel-1 time series on HPC clusters based on GMTSAR and Slurm.

Slurm Rs ⭐ 21

Rust bindings for interacting with the Slurm workload manager.

Slurm Job Exporter ⭐ 21

Prometheus exporter for the stats in the cgroup accounting with slurm. This will also collect stats of a job using NVIDIA GPUs.

CLUES: an energy management system for HPC Clusters and Cloud infrastructures.

Ib2slurm ⭐ 20

A tool to generate slurm topology configuration from infiniband network discovery.

Neural Ensemble Search for Uncertainty Estimation and Dataset Shift

Slurm Prometheus Exporter ⭐ 20

Prometheus exporter for slurm job/node data

Assemblycomparator2 ⭐ 20

🦠📇 Compare prokaryotic genomic assemblies

Sta141c Winter19 ⭐ 20

course materials for UC Davis STA141C: Big Data & High Performance Statistical Computing

Lsf Handbook ⭐ 19

IBM LSF manual translation and practical experience

Maliampi ⭐ 19

Maximum Likelihood Amplicon Pipeline

Sparkhpc ⭐ 19

launching and controlling spark on hpc clusters

Slurm Bank ⭐ 19

SLURM Bank, a collection of wrapper scripts to give slurm GOLD like capabilities for managing resources.

Ngspipe2go ⭐ 19

a set of NGS pipelines

Puppet Slurm ⭐ 19

A Puppet module designed to configure and manage SLURM(see https://slurm.schedmd.com/), an open source, fault-tolerant, and highly scalable cluster management and job scheduling system for large and small Linux clusters

Slurmspawner ⭐ 19

Custom Spawner for Jupyterhub to start slurm jobs when users log in

BAO Model Fitting Made Easy

Rnaseq Pipeline ⭐ 18

RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.

A wrapper for secure running of Docker containers on Slurm

Skynet Ddp Slurm Example ⭐ 18

Example of using PyTorch DistributedDataParallel and SLURM on skynet

Knowledge-primed neural networks

Uabrc.github.io ⭐ 18

UAB Research Computing Documentation

spart: a user-oriented partition info command for slurm

Kernel Mod ⭐ 18

NeurIPS 2018. Linear-time model comparison tests.

dead Simple Queue - Slurm arrays for files with jobs in them.

Cluster Administration tools

Aws Eda Slurm Cluster ⭐ 17

AWS Slurm Cluster for EDA Workloads

Spank Private Tmp ⭐ 17

Slurm spank plugin to give each job private /tmp (and/or other dirs)

Submit functions and shell scripts to torque and slurm clusters or local machines using python.

Alphafold_singularity ⭐ 17

Singularity recipe for AlphaFold

Genome_assembly ⭐ 17

Cluster Utils ⭐ 17

Collection of utilities / helper scripts to make life easier on our HPC clusters.

Data Acc ⭐ 17

Data Accelerator: Creates a burst buffer from generic hardware and integrates it with Slurm https://www.hpc.cam.ac.uk/research/data-acc http://www.stackhpc.com

Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.

Cluster_tutorials ⭐ 16

Generic slurm tutorials that explain intricacies of the cluster as implemented

Quickbytes ⭐ 16

Development of short tutorials for UNM's Center for Advanced Research Computing

Slurm_gpu_ubuntu ⭐ 16

Instructions for setting up a SLURM cluster using Ubuntu 18.04.3 with GPUs.

Rl_representations ⭐ 16

Learning representations for RL in Healthcare under a POMDP assumption

R functions for project setup, data cleaning, machine learning, SuperLearner, parallelization, and targeted learning.

CADEE: Computer-Aided Directed Evolution of Enzymes

Fsic Test ⭐ 15

ICML 2017. Kernel-based adaptive linear-time independence test.

Puppet Slurm ⭐ 15

Puppet module for SLURM client and server

Slurm Spank Plugins ⭐ 15

Set of SLURM spank plugins used at LLNL

Poretally ⭐ 15

Benchmark MinION assembler pipelines and publish your results in a heartbeat!

Informme ⭐ 15

An information-theoretic pipeline for methylation analysis of WGBS data

Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding

Shine Cluster ⭐ 15

Simple High performance Infrastructure for Neural network Experiments

Protease Gcnn Pytorch ⭐ 15

A scientific web portal that allows users to create and submit workflows to HTCondor (Dagman), Slurm, OpenLava (LSF), Torque (PBS)

Sc19 Dl Tutorial ⭐ 14

Hands-on material for the SC19 tutorial, Deep Learning at Scale

Slurmclustermanager.jl ⭐ 14

julia package for running code on slurm clusters

Popsycle ⭐ 14

Population Synthesis for Compact-object Lensing Events

Mushroom Rl Benchmark ⭐ 14

Benchmarking suite for MushroomRL Deep RL algorithms

Launcher Scripts ⭐ 13

A set of launcher scripts to be used with OAR for running jobs on the UL HPC platform

Benchmarking framework for Feature Selection and Feature Ranking algorithms 🚀

Slurmtools ⭐ 13

Custom Slurm tools

Reproducible research and reusable acyclic workflows in Python. Execute code on HPC systems as if you executed them on your personal computer!

Simple HPC queuing system adapter for Python on based jinja templates to automate the submission script creation.

APEL client and server source code.

Persist.jl ⭐ 13

Persistent jobs

Jupyterhub_moss ⭐ 13

Jupyterhub MOdular Slurm Spawner

Engaging_cluster_howto ⭐ 13

A brief introduction to the engaging cluster for the NSE and PSFC groups. Assorted recipes and gists.

Metagenomics_workflows ⭐ 13

Workflows for metagenomic sequence data processing and analysis.

Cuda_deployment_tutorial ⭐ 13

Scripts to Deploy GPU Enabled Containers

Graphtyper Pipelines ⭐ 13

Recommended Graphtyper pipelines

101-200 of 397 search results

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