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Search results for high performance computing
high-performance-computing
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276 search results found
Mdbenchmark
⭐
67
Quickly generate, start and analyze benchmarks for molecular dynamics simulations.
Bifrost
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64
A stream processing framework for high-throughput applications.
Compyle
⭐
63
Execute a subset of Python on HPC platforms
Opensbli
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61
A framework for the automated derivation and parallel execution of finite difference solvers on a range of computer architectures.
Nasoq
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61
NASOQ:Numerically Accurate Sparsity Oriented QP Solver
Targets Shiny
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60
Example Shiny app containing a targets pipeline.
Snakefiles
⭐
58
🐍 Snakefiles for common RNA-seq data analysis workflows.
Drake Examples
⭐
58
Example workflows for the drake R package
Drake
⭐
57
The user manual for the drake R package
Pencilarrays.jl
⭐
56
Distributed Julia arrays using the MPI protocol
Daceml
⭐
55
A Data-Centric Compiler for Machine Learning
Easydist
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55
Automated Parallelization System and Infrastructure for Multiple Ecosystems
Shinyheatmap
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54
Web application for enormous biological heatmaps
Enrico
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52
ENRICO: Exascale Nuclear Reactor Investigative COde
Gblastn
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52
G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.
Flashweave.jl
⭐
52
Inference of microbial interaction networks from large-scale heterogeneous abundance data
Ensembl Hive
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50
EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource
Radar Electrooptical Simulation
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50
(REOS) Radar and Electro-Optical Simulation Framework written in C++.
Rbcuda
⭐
50
CUDA bindings for Ruby
Hybridq
⭐
49
HybridQ is a highly extensible platform designed to provide a common framework to integrate multiple state-of-the-art techniques to simulate large scale quantum circuits on a variety of hardware. HybridQ provides tools to manipulate, develop, and extend noiseless and noisy circuits for different hardware architectures. HybridQ also supports large-scale high-performance computing (HPC) simulations, automatically balancing workload among different processor nodes and enabling the use of multiple b
Isicle
⭐
49
In silico chemical library engine for high-accuracy chemical property prediction
Memilio
⭐
47
Modular spatio-temporal models for epidemic and pandemic simulations
Radar_electrooptical_simulation
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44
(REOS) Radar and ElectroOptical Simulation Framework written in Fortran.
Linnea
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43
Linnea is an experimental tool for the automatic generation of optimized code for linear algebra problems.
Stantargets
⭐
42
Reproducible Bayesian data analysis pipelines with targets and cmdstanr
Fluidsim
⭐
41
🌊 Framework for studying fluid dynamics with numerical simulations using Python (publish-only mirror). The main repo is hosted on https://foss.heptapod.net (Gitlab fork supporting Mercurial).
Psydac
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41
Python 3 library for isogeometric analysis
Pi2
⭐
41
C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.
Sympiler
⭐
40
Sympiler is a Code Generator for Transforming Sparse Matrix Codes
Parsec
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39
PaRSEC is a generic framework for architecture aware scheduling and management of micro-tasks on distributed, GPU accelerated, many-core heterogeneous architectures. PaRSEC assigns computation threads to the cores, GPU accelerators, overlaps communications and computations and uses a dynamic, fully-distributed scheduler based on architectural features such as NUMA nodes and algorithmic features such as data reuse.
Pressio
⭐
39
core C++ library
Ctv Hpc
⭐
39
CRAN Task View: High-Performance Computing with R
Wabbit
⭐
39
Wavelet Adaptive Block-Based solver for Interactions with Turbulence
Colmena
⭐
38
Library for steering campaigns of simulations on supercomputers
Rmldnn
⭐
38
RocketML Deep Neural Networks
Litemort
⭐
36
A memory efficient GBDT on adaptive distributions. Much faster than LightGBM with higher accuracy. Implicit merge operation.
Relapack
⭐
35
Recursive LAPACK Collection
Mhpc Natural Language Processing Lectures
⭐
34
This is the second part of the Deep Learning Course for the Master in High-Performance Computing (SISSA/ICTP).)
Axisem
⭐
34
AxiSEM is a parallel spectral-element method to solve 3D wave propagation in a sphere with axisymmetric or spherically symmetric visco-elastic, acoustic, anisotropic structures.
Rocketsled
⭐
33
plug-n-play black box optimizer for high-throughput computing
Kokkos Remote Spaces
⭐
32
This repository contains Kokkos Remote Spaces, which implements distributed shared memory support for Kokkos.
Mptrac
⭐
32
Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.
Runko
⭐
31
Modern C++/python CPU/GPU plasma toolbox
Julea
⭐
31
A Flexible Storage Framework for HPC
Bandwidthbenchmark.jl
⭐
30
Measuring memory bandwidth using TheBandwidthBenchmark
Affineinvariantmcmc.jl
⭐
29
Affine Invariant Markov Chain Monte Carlo (MCMC) Ensemble sampler
Edge
⭐
29
Extreme-scale Discontinuous Galerkin Environment (EDGE)
Cp3d
⭐
29
CP3d is a comprehensive Euler-Lagrange solver for the direct numerical simulations of particle-laden flows.
Siminf
⭐
29
A framework for data-driven stochastic disease spread simulations
Slsm Tree
⭐
29
High-Performance C++ Data System
Vulk
⭐
28
Desktop/Android Python game development framework on top of Vulkan API
Hpc Internships
⭐
28
Supercomputing @ GT has compiled a list of organizations that offer internships and experiences in HPC and applications of HPC.
Mot
⭐
28
Multi-threaded Optimization Toolbox
Low Latency System
⭐
28
Everything about low latency system.
Rabbittclust
⭐
28
RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches
Dss
⭐
27
Disaggregated Storage Solution
Lb T
⭐
27
Multi-threaded object-oriented computational fluid dynamics (CFD) code for three-dimensional incompressible fluid flow on a regular grid with the incompressible lattice-Boltzmann method (LBM) for general lattices (D2Q9, D3Q15, D3Q19, D3Q27, ...) with A-A pattern for indexing - programmed in C++17, multi-threaded with OpenMP
Snac
⭐
27
A multi-block solver for massively parallel direct numerical simulations (DNS) of fluid flows
Plinycompute
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27
A system for development of high-performance, data-intensive, distributed computing, applications, tools, and libraries.
Cryosparc Tools
⭐
26
Python library that enables scripting access to CryoSPARC, a cryo-EM software package.
Parallelutilities.jl
⭐
25
Fast and easy parallel mapreduce on HPC clusters
Nodal.jl
⭐
25
NODAL is an Open Distributed Autotuning Library in Julia
Dotmp
⭐
24
A collection of powerful abstractions for parallel programming in .NET with an OpenMP-like API.
Bioviewer
⭐
23
Protein (.pdb, .cif and .fasta) viewer for iPhone, iPad and Mac, using SwiftUI + Metal.
Fastheatmap
⭐
23
Super high performance interactive heatmap software
Perigee
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22
PERIGEE is a finite element code for multiphysics analysis
Osaris
⭐
21
Scripts to facilitate parallel InSAR processing and analysis of Sentinel-1 time series on HPC clusters based on GMTSAR and Slurm.
Hermit Playground
⭐
21
A playground to build C/C++/Go/Fortran applications on top of RustyHermit
Vely
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21
Vely is a general-purpose framework for building high-performance applications, especially well-suited for web applications This is its official source repo. Go to https://vely.dev/pkg/ for installation instructions.
Hicma
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21
HiCMA: Hierarchical Computations on Manycore Architectures
Polymer Molecular Dynamics
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21
Perform high-throughput polymer molecular dynamics simulations with ease
Fabsim3
⭐
20
Python 3 version of FabSim
Autonfeat
⭐
20
A High Performance Library for Time-Series Featurization.
Lsf Handbook
⭐
19
IBM LSF manual translation and practical experience
Spla
⭐
19
An open-source generalized sparse linear algebra framework with vendor-agnostic GPUs accelerated computations
Tvm Lesson
⭐
19
动手学习TVM核心原理教程
Apfp
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19
FPGA acceleration of arbitrary precision floating point computations.
Spinparser
⭐
19
Pseudofermion functional renormalization group solver for (frustrated) quantum magnets in two and three spatial dimensions.
Parpe
⭐
19
Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.
Twingraph
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19
TwinGraph is a Python framework for distributed container orchestration using Kubernetes clusters, Docker Compose/Swarm or cloud resources on AWS (AWS Lambda, AWS Batch, Amazon EKS). Applications include high-throughput simulations, simulation-driven optimization, Digital Twins and machine learning.
Aeronic
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18
Aeron proxy generator
Uabrc.github.io
⭐
18
UAB Research Computing Documentation
Ntpoly
⭐
18
A massively parallel library for computing the functions of sparse matrices.
Atomizer
⭐
17
Imagine thousands of machines across multiple cloud instances and data centers executing simultaneous processing for you with minimal deployment effort. Enter Atomizer - a Go library that facilitates massively parallel and distributed computing. Fashioned after Go itself using similar CSP paradigms.
Longbow
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17
Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.
Prospr
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17
Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.
Modeldeployment
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17
CRAN Task View: Model Deployment with R
Skellysim
⭐
17
Hydrodynamic Cytoskeleton Simulator
Alphafold_singularity
⭐
17
Singularity recipe for AlphaFold
Hyperint
⭐
17
A single head file high precision integer library
Mimir
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17
Mimir is a new implementation of MapReduce over MPI. Mimir inherits the core principles of existing MapReduce frameworks, such as MR-MPI, while redesigning the execution model to incorporate a number of sophisticated optimization techniques that achieve similar or better performance with significant reduction in the amount of memory used.
Biguq.jl
⭐
17
Bayesian Information Gap Decision Theory
Jasminegraph
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16
Distributed Graph Database Server
Blas Benchmarks
⭐
16
Timing results for BLAS (Basic Linear Algebra Subprograms) libraries in R
Iris
⭐
16
A unified framework across multiple programming platforms
Targets
⭐
16
User manual of the targets R pacakge
Mpi Hs
⭐
16
MPI bindings for Haskell
Targetsketch
⭐
15
Sketch a pipeline of targets in an interactive web app
Poissonrandom.jl
⭐
15
Fast Poisson Random Numbers in pure Julia for scientific machine learning (SciML)
Hpc Social.github.io
⭐
15
Portal for the HPC Social community ⭐️
101-200 of 276 search results
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