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The Top 23 Zarr Open Source Projects

Open source projects categorized as Zarr
Categories > Zarr
Zarr Python ⭐ 1,336
An implementation of chunked, compressed, N-dimensional arrays for Python.
dependent packages 429total releases 73most recent commit 10 days agopypi zarr} Downloads
Tifffile ⭐ 436
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
dependent packages 620total releases 123most recent commit 5 months agopypi tifffile} Downloads
Viv ⭐ 245
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
dependent packages 7total releases 51most recent commit 3 months agonpm @hms-dbmi/viv} Downloads
Arco Era5 ⭐ 132
Recipes for reproducing Analysis-Ready & Cloud Optimized (ARCO) ERA5 datasets.
most recent commit 6 months ago
Ome Zarr Py ⭐ 126
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
dependent packages 28total releases 45most recent commit 4 months agopypi ome-zarr} Downloads
Vitessce ⭐ 124
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
dependent packages 26total releases 18most recent commit 3 months agonpm @vitessce/utils} Downloads
Zarr.js ⭐ 113
Javascript implementation of Zarr
dependent packages 19total releases 27most recent commit 5 months agonpm zarr} Downloads
Xarray Beam ⭐ 110
Distributed Xarray with Apache Beam
dependent packages 2total releases 11most recent commit 5 months agopypi xarray-beam} Downloads
Pangeo Forge Recipes ⭐ 108
Python library for building Pangeo Forge recipes.
dependent packages 4total releases 22most recent commit 5 months agopypi pangeo-forge-recipes} Downloads
Z5 ⭐ 98
Lightweight C++ and Python interface for datasets in zarr and N5 format
dependent packages 1total releases 23most recent commit 6 months ago
Vizarr ⭐ 89
A minimal, purely client-side program for viewing Zarr-based images with Viv & ImJoy.
most recent commit 6 months ago
Echopype ⭐ 80
Enabling interoperability and scalability in ocean sonar data analysis
dependent packages 6total releases 28most recent commit 3 months agopypi echopype} Downloads
Cubed ⭐ 80
Bounded-memory serverless distributed N-dimensional array processing
dependent packages 1total releases 16most recent commit 3 months agopypi cubed} Downloads
Zarr Specs ⭐ 71
Zarr core protocol for storage and retrieval of N-dimensional typed arrays
most recent commit 4 months ago
Hagelslag ⭐ 64
Hagelslag supports segmentation and tracking of weather fields and scalable verification, including performance diagrams and reliability diagrams.
total releases 4most recent commit 4 months ago
Zen3geo ⭐ 56
The 🌏 data science library you've been waiting for~
total releases 8most recent commit 3 months ago
Sat Extractor ⭐ 52
Extract Satellite Imagery from public constellations at scale
most recent commit 2 years ago
Mesogeos ⭐ 29
A multi-purpose dataset for data-driven wildfire modeling in the Mediterranean. Deep Learning models for wildfire modeling, e.g. danger forecasting, burned area prediction, etc
most recent commit 4 months ago
Cesm Lens Aws ⭐ 29
Examples of analysis of CESM LENS data publicly available on Amazon S3 (us-west-2 region) using xarray and dask
most recent commit 3 years ago
Zarrita.js ⭐ 26
A JavaScript toolkit for working with chunked, compressed, n-dimensional arrays
dependent packages 7total releases 38most recent commit 4 months agonpm zarrita} Downloads
Zarr Illustrations Falk 2022 ⭐ 26
Illustrations created by Henning Falk for the Zarr community
most recent commit 6 months ago
Climetlab S2s Ai Challenge ⭐ 26
climetlab plugin to access subseasonal to seasonal (S2S) forecasts for the s2s-ai-challenge
total releases 20most recent commit 8 months ago
Mdio Python ⭐ 24
Cloud native, scalable storage engine for various types of energy data.
total releases 31most recent commit 4 months ago
The 10 Most Depended On Zarr Open Source Projects
Tifffile ⭐ 436
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
dependent packages 620total releases 123latest release December 09, 2023most recent commit 5 months agopypi tifffile} Downloads
Zarr Python ⭐ 1,336
An implementation of chunked, compressed, N-dimensional arrays for Python.
dependent packages 429total releases 73latest release August 18, 2023most recent commit 10 days agopypi zarr} Downloads
Ome Zarr Py ⭐ 126
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
dependent packages 28total releases 45latest release November 14, 2023most recent commit 4 months agopypi ome-zarr} Downloads
Vitessce ⭐ 124
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
dependent packages 26total releases 18latest release November 30, 2023most recent commit 3 months agonpm @vitessce/utils} Downloads
Zarr.js ⭐ 113
Javascript implementation of Zarr
dependent packages 19total releases 27latest release October 09, 2023most recent commit 5 months agonpm zarr} Downloads
Zarrita.js ⭐ 26
A JavaScript toolkit for working with chunked, compressed, n-dimensional arrays
dependent packages 7total releases 38latest release November 06, 2023most recent commit 4 months agonpm zarrita} Downloads
Viv ⭐ 245
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
dependent packages 7total releases 51latest release November 17, 2023most recent commit 3 months agonpm @hms-dbmi/viv} Downloads
Echopype ⭐ 80
Enabling interoperability and scalability in ocean sonar data analysis
dependent packages 6total releases 28latest release November 21, 2023most recent commit 3 months agopypi echopype} Downloads
Pangeo Forge Recipes ⭐ 108
Python library for building Pangeo Forge recipes.
dependent packages 4total releases 22latest release November 15, 2023most recent commit 5 months agopypi pangeo-forge-recipes} Downloads
Napari Ome Zarr ⭐ 23
A napari plugin for zarr backed OME-NGFF images
dependent packages 3total releases 12latest release July 06, 2022most recent commit 4 months agopypi napari-ome-zarr} Downloads
The 10 Latest Releases In Zarr Open Source Projects
Tifffile ⭐ 436
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
dependent packages 620total releases 123latest release December 09, 2023most recent commit 5 months agopypi tifffile} Downloads
Xarray Beam ⭐ 110
Distributed Xarray with Apache Beam
dependent packages 2total releases 11latest release December 01, 2023most recent commit 5 months agopypi xarray-beam} Downloads
Vitessce ⭐ 124
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
dependent packages 26total releases 18latest release November 30, 2023most recent commit 3 months agonpm @vitessce/utils} Downloads
Zcollection ⭐ 10
Python library allowing to manipulate data splited into a collection of groups stored in Zarr format.
total releases 19latest release November 23, 2023most recent commit 4 months ago
Echopype ⭐ 80
Enabling interoperability and scalability in ocean sonar data analysis
dependent packages 6total releases 28latest release November 21, 2023most recent commit 3 months agopypi echopype} Downloads
Viv ⭐ 245
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
dependent packages 7total releases 51latest release November 17, 2023most recent commit 3 months agonpm @hms-dbmi/viv} Downloads
Pangeo Forge Recipes ⭐ 108
Python library for building Pangeo Forge recipes.
dependent packages 4total releases 22latest release November 15, 2023most recent commit 5 months agopypi pangeo-forge-recipes} Downloads
Ome Zarr Py ⭐ 126
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
dependent packages 28total releases 45latest release November 14, 2023most recent commit 4 months agopypi ome-zarr} Downloads
Zarrita.js ⭐ 26
A JavaScript toolkit for working with chunked, compressed, n-dimensional arrays
dependent packages 7total releases 38latest release November 06, 2023most recent commit 4 months agonpm zarrita} Downloads
Mdio Python ⭐ 24
Cloud native, scalable storage engine for various types of energy data.
total releases 31latest release October 25, 2023most recent commit 4 months ago
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