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The Top 15 Python Rna Seq Single Cell Open Source Projects

Open source projects categorized as Python Rna Seq Single Cell
Categories > Rna Seq
Categories > Single Cell
Scnym ⭐ 71
Semi-supervised adversarial neural networks for classification of single cell transcriptomics data
total releases 5most recent commit 4 months ago
Covid 19 Rna Seq Datasets ⭐ 61
A repository for sharing information on available COVID-19 RNA-Seq datasets
most recent commit 2 years ago
Cell2cell ⭐ 44
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
most recent commit 5 months ago
Cellsnp ⭐ 37
Pileup biallelic SNPs from single-cell and bulk RNA-seq data
total releases 14most recent commit 3 years ago
Scribe Py ⭐ 36
Regulatory networks with Direct Information in python
most recent commit a year ago
Brie ⭐ 34
BRIE: Bayesian Regression for Isoform Estimate in Single Cells
most recent commit a year ago
Ngs ⭐ 30
Next-Gen Sequencing tools from the Horvath Lab
most recent commit a year ago
Deepcycle ⭐ 19
Cell cycle inference in single-cell RNA-seq
most recent commit a year ago
Velodyn ⭐ 15
Dynamical systems methods for RNA velocity analysis
most recent commit 3 years ago
Lr Splitpipe ⭐ 13
Demultiplexing and debarcoding tool designed for LR-Split-seq data.
most recent commit 6 months ago
Couplednmf ⭐ 11
Coupled clustering of single cell genomic data
most recent commit 3 years ago
Rna Combine ⭐ 11
RNA-seq data comprehensive data analysis toolbox
most recent commit 2 years ago
Ursm ⭐ 10
A Unified RNA Sequencing Model (URSM) for joint analysis of single cell and bulk RNA-seq data.
most recent commit 7 years ago
Scmmd ⭐ 7
Maximum mean discrepancy comparisons for single cell profiling experiments
most recent commit 2 years ago
Discotoolkit_py ⭐ 7
DISCO by Scientist for Scientist for You
most recent commit 10 months ago
The 2 Latest Releases In Python Rna Seq Single Cell Open Source Projects
Scnym ⭐ 71
Semi-supervised adversarial neural networks for classification of single cell transcriptomics data
total releases 5latest release March 25, 2021most recent commit 4 months ago
Cellsnp ⭐ 37
Pileup biallelic SNPs from single-cell and bulk RNA-seq data
total releases 14latest release August 03, 2020most recent commit 3 years ago
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