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The Top 6 Nextstrain Open Source Projects

Open source projects categorized as Nextstrain
Categories > Nextstrain
Ncov ⭐ 1,348
Nextstrain build for novel coronavirus SARS-CoV-2
most recent commit 3 months ago
Covariants ⭐ 310
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
most recent commit 3 months ago
Nextclade ⭐ 190
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
dependent packages 2total releases 52most recent commit 3 months agonpm @neherlab/nextclade} Downloads
Mpox ⭐ 37
Nextstrain build for mpox virus
most recent commit 3 months ago
Ncov Ingest ⭐ 34
A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV rebuilds.
most recent commit 3 months ago
Ncov Clades Schema ⭐ 9
Renders SVG schema of SARS-CoV-2 clade as defined by Nextstrain
most recent commit 4 months ago
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