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The Top 12 Mlst Open Source Projects

Open source projects categorized as Mlst
Categories > Mlst
Chewbbaca ⭐ 113
BSR-Based Allele Calling Algorithm
total releases 40most recent commit 5 months ago
Bigsdb ⭐ 53
Bacterial Isolate Genome Sequence Database (BIGSdb): A platform for gene-by-gene bacterial population annotation and analysis.
most recent commit 5 months ago
Grapetree ⭐ 34
GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click the first link to launch: https://achtman-lab.github.io/GrapeTree/MSTree_hol
total releases 16most recent commit 3 years ago
Etoki ⭐ 31
all methods related to Enterobase
most recent commit 10 months ago
Bac Genomics Scripts ⭐ 28
Collection of scripts for bacterial genomics
most recent commit 5 years ago
Stringmlst ⭐ 27
Fast k-mer based tool for multi locus sequence typing (MLST)
total releases 20most recent commit 4 years ago
Btyper3 ⭐ 13
In silico taxonomic classification of Bacillus cereus group genomes using whole-genome sequencing data
total releases 7most recent commit a year ago
Sting ⭐ 12
Ultrafast sequence typing and gene detection from NGS raw reads
most recent commit 3 years ago
Metamlst ⭐ 7
MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.
most recent commit a year ago
Pubmlst_client ⭐ 7
List and download schemes from pubMLST.org and other BIGSDB servers
most recent commit 3 years ago
Taranis ⭐ 5
cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.
most recent commit 5 months ago
Mlstar ⭐ 5
An easy way of MLSTyping your genomes in R.
most recent commit 3 years ago
The 4 Latest Releases In Mlst Open Source Projects
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