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The Top 23 Jupyter Notebook Neuroscience Open Source Projects

Open source projects categorized as Jupyter Notebook Neuroscience
Categories > Data Processing > Jupyter Notebook
Categories > Science > Neuroscience
Course Content ⭐ 2,527
NMA Computational Neuroscience course
most recent commit 4 months ago
Precourse ⭐ 587
A repo for the pre-course work at home exercises
most recent commit 4 months ago
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5most recent commit 3 months agopypi lava-nc} Downloads
Suite2p ⭐ 306
cell detection in calcium imaging recordings
total releases 90most recent commit 4 months ago
Org.geppetto ⭐ 184
Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.
most recent commit 4 years ago
Deepeeg ⭐ 180
Deep Learning with Tensor Flow for EEG MNE Epoch Objects
most recent commit 2 years ago
Artificial Intelligence And Machine Learning ⭐ 135
A repository for implementation of artificial intelligence algorithm which includes machine learning and deep learning algorithm as well as classical AI search algorithm
most recent commit a year ago
Regularized Linear Autoencoders ⭐ 132
Loss Landscapes of Regularized Linear Autoencoders
most recent commit 2 years ago
Analyzing_neural_time_series ⭐ 124
python implementations of Analyzing Neural Time Series Textbook
most recent commit 2 years ago
Nsci801 Quantneuro ⭐ 112
NSCI 801 (Queen's U) Quantitative Neuroscience course materials
most recent commit 2 years ago
Nn Brain ⭐ 102
Tutorial codes for modeling brains with neural nets
most recent commit 3 years ago
Twpca ⭐ 98
🕝 Time-warped principal components analysis (twPCA)
total releases 2most recent commit 3 years ago
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9most recent commit 3 months agopypi bg-atlasapi} Downloads
Nupic.research ⭐ 94
Experimental algorithms. Unsupported.
most recent commit a year ago
Tvb Root ⭐ 91
Main TVB codebase
total releases 5most recent commit 4 months ago
Neuroscience_tutorials ⭐ 90
Some tutorials for students of neuroscience
most recent commit 6 months ago
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65most recent commit 8 months agopypi pyabf} Downloads
Labhacks ⭐ 68
Resources for data driven neuroscientists.
most recent commit 2 years ago
Xcorr Notebooks ⭐ 67
An ongoing collection of ipython notebooks on neuroscience from xcorr: computational neuroscience.
most recent commit 2 years ago
Computational Neuroscience Uw ⭐ 61
Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington
most recent commit 7 years ago
Pymindaffectbci ⭐ 55
Python SDK for high performance on-line Brain Computer Interface development.
total releases 25most recent commit 9 months ago
Alphatracker ⭐ 52
AlphaTracker is a computer vision pipeline with the practical and real-time advantages , which requires minimal hardware requirements and produces reliable tracking of multiple unmarked animals. An easy-to-use user interface further enables manual inspection and curation of results.
most recent commit 7 months ago
Datasciencepsychneuro ⭐ 50
Repository for the Data Science for Psychology and Neuroscience course at CMU (Verstynen)
most recent commit 3 months ago
The 5 Most Depended On Jupyter Notebook Neuroscience Open Source Projects
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9latest release March 31, 2022most recent commit 3 months agopypi bg-atlasapi} Downloads
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5latest release November 15, 2023most recent commit 3 months agopypi lava-nc} Downloads
Neuronunit ⭐ 32
A package for data-driven validation of neuron and ion channel models using SciUnit
dependent packages 1total releases 7latest release July 04, 2016most recent commit 3 years agopypi neuronunit} Downloads
Cubids ⭐ 16
Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.
dependent packages 1total releases 1latest release November 12, 2021most recent commit 3 months agopypi cubids-bond-fork} Downloads
The 10 Latest Releases In Jupyter Notebook Neuroscience Open Source Projects
Suite2p ⭐ 306
cell detection in calcium imaging recordings
total releases 90latest release November 29, 2023most recent commit 4 months ago
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5latest release November 15, 2023most recent commit 3 months agopypi lava-nc} Downloads
Spyglass ⭐ 50
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
total releases 11latest release October 23, 2023most recent commit 3 months ago
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Pylossless ⭐ 11
🧠 EEG Processing pipeline that annotates continuous data
total releases 1latest release April 29, 2023most recent commit 3 months ago
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9latest release March 31, 2022most recent commit 3 months agopypi bg-atlasapi} Downloads
Pymindaffectbci ⭐ 55
Python SDK for high performance on-line Brain Computer Interface development.
total releases 25latest release March 18, 2022most recent commit 9 months ago
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