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The Top 18 Flow Cytometry Open Source Projects

Open source projects categorized as Flow Cytometry
Categories > Flow Cytometry
Flowkit ⭐ 114
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
total releases 29most recent commit a year ago
Spectre ⭐ 50
A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.
most recent commit 7 months ago
Cytometry Clustering Comparison ⭐ 30
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
most recent commit 7 years ago
Premessa ⭐ 29
R package for pre-processing of mass and flow cytometry data
most recent commit 2 years ago
Flowio ⭐ 29
A Python library for reading and writing Flow Cytometry Standard (FCS) files
dependent packages 6total releases 21most recent commit a year agopypi FlowIO} Downloads
Gigasom.jl ⭐ 26
Huge-scale, high-performance flow cytometry clustering in Julia
most recent commit a year ago
Cytopy ⭐ 19
A data-centric flow/mass cytometry automated analysis framework
most recent commit 3 years ago
Fcs ⭐ 17
Javascript / node.js code to read FCS flow cytometry data
dependent packages 4total releases 11most recent commit a year agonpm fcs} Downloads
Fcsfiles.jl ⭐ 12
🧫 Read Flow Cytometry Standard (FCS) files in Julia
most recent commit 2 years ago
Vite ⭐ 10
R package for analysis of single-cell data using graphs
most recent commit a year ago
Flowutils ⭐ 9
FlowUtils is a Python package containing various utility functions related to flow cytometry analysis, primarily focused on compensation and transformation tasks commonly used within the flow community.
dependent packages 5total releases 22most recent commit 8 months agopypi FlowUtils} Downloads
Grappolo ⭐ 9
R package to cluster single-cell data and generate features that can be used for model building
most recent commit 3 years ago
Popcycle ⭐ 9
Popcycle is an R package that offers reproducible analytical tools to analyze flow cytometry data collected by SeaFlow
most recent commit 5 months ago
Flopr ⭐ 7
An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader data, and removing debris and doublets and calibration of flow cytometry data.
most recent commit 5 months ago
Cecelia ⭐ 7
Framework for image and flow cytometry analysis
most recent commit 4 months ago
Panorama ⭐ 6
R package for interactive visualization and analysis of single-cell data
most recent commit 5 years ago
2020_grant ⭐ 6
Code base for the Grant, Morales-Nebreda, and Markov et al., “Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia” Nature (2021) paper
most recent commit 10 months ago
Flowdashboard ⭐ 6
Shiny Modules for visualizing flow cytometry data
most recent commit 6 years ago
The 3 Most Depended On Flow Cytometry Open Source Projects
Flowio ⭐ 29
A Python library for reading and writing Flow Cytometry Standard (FCS) files
dependent packages 6total releases 21latest release January 26, 2023most recent commit a year agopypi FlowIO} Downloads
Fcs ⭐ 17
Javascript / node.js code to read FCS flow cytometry data
dependent packages 4total releases 11latest release June 19, 2023most recent commit a year agonpm fcs} Downloads
The 4 Latest Releases In Flow Cytometry Open Source Projects
Fcs ⭐ 17
Javascript / node.js code to read FCS flow cytometry data
dependent packages 4total releases 11latest release June 19, 2023most recent commit a year agonpm fcs} Downloads
Flowio ⭐ 29
A Python library for reading and writing Flow Cytometry Standard (FCS) files
dependent packages 6total releases 21latest release January 26, 2023most recent commit a year agopypi FlowIO} Downloads
Flowkit ⭐ 114
A Python toolkit for flow cytometry analysis supporting GatingML and FlowJo workspaces
total releases 29latest release September 01, 2022most recent commit a year ago
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