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The Top 23 Neuroscience Electrophysiology Open Source Projects

Open source projects categorized as Neuroscience Electrophysiology
Categories > Electrophysiology
Categories > Science > Neuroscience
Spikeinterface ⭐ 388
A Python-based module for creating flexible and robust spike sorting pipelines.
dependent packages 15total releases 42most recent commit 17 days agopypi spikeinterface} Downloads
Kilosort ⭐ 382
Fast spike sorting with drift correction for up to a thousand channels
total releases 1most recent commit a month ago
Fooof ⭐ 307
Parameterizing neural power spectra into periodic & aperiodic components.
dependent packages 5total releases 13most recent commit 6 months agopypi fooof} Downloads
Bluepyopt ⭐ 190
Blue Brain Python Optimisation Library
dependent packages 7total releases 394most recent commit 4 months agopypi bluepyopt} Downloads
Elephant ⭐ 174
Elephant is the Electrophysiology Analysis Toolkit
dependent packages 14total releases 25most recent commit 3 months agopypi elephant} Downloads
Spectral_connectivity ⭐ 109
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
dependent packages 3total releases 16most recent commit 6 months agopypi spectral-connectivity} Downloads
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65most recent commit 8 months agopypi pyabf} Downloads
Cellexplorer ⭐ 81
CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cells acquired using extracellular electrodes.
most recent commit 4 months ago
Efel ⭐ 60
Electrophys Feature Extraction Library
dependent packages 9total releases 321most recent commit 3 months agopypi efel} Downloads
Spyglass ⭐ 50
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
total releases 11most recent commit 3 months ago
Oat ⭐ 48
Real-time position tracker for behavioral research
most recent commit 6 years ago
Spectravis ⭐ 38
An interactive web-based neuroscience app for analyzing task-related functional networks over time and frequency
dependent packages 1total releases 1most recent commit 2 years agonpm spectravis} Downloads
Combinato ⭐ 36
Automatic spike sorting, cluster visualization, spike sorting GUIs
most recent commit 5 months ago
Acquisition Board ⭐ 35
Hardware interface for streaming up to 512 channels of neural data via USB
most recent commit 3 years ago
Pyret ⭐ 35
Python tools for analysis of neurophysiology data
total releases 13most recent commit 7 months ago
Pinpoint ⭐ 32
Multi-probe trajectory planning in an intuitive 3D environment
most recent commit 3 months ago
Nelpy ⭐ 31
Neuroelectrophysiology object model and data analysis in Python.
total releases 14most recent commit 3 years ago
Neuroglia ⭐ 30
a Python machine learning library for neurophysiology data
total releases 1most recent commit 5 years ago
Neuroshapes ⭐ 29
Open schemas for F.A.I.R. neuroscience data
most recent commit 3 years ago
Neurotic ⭐ 25
Curate, visualize, annotate, and share your behavioral ephys data using Python
total releases 20most recent commit a year ago
Onix ⭐ 23
ONI-compatible hardware, firmware, and host APIs for advanced neuroscience experiments.
total releases 1most recent commit 3 years ago
Braintime ⭐ 14
Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive processes.
most recent commit 2 years ago
Shybrid ⭐ 9
a graphical tool for generating hybrid ground-truth spiking data for evaluating spike sorting performance
dependent packages 2total releases 8most recent commit 2 years agopypi shybrid} Downloads
The 9 Most Depended On Neuroscience Electrophysiology Open Source Projects
Spikeinterface ⭐ 388
A Python-based module for creating flexible and robust spike sorting pipelines.
dependent packages 15total releases 42latest release November 13, 2023most recent commit 17 days agopypi spikeinterface} Downloads
Elephant ⭐ 174
Elephant is the Electrophysiology Analysis Toolkit
dependent packages 14total releases 25latest release November 10, 2023most recent commit 3 months agopypi elephant} Downloads
Efel ⭐ 60
Electrophys Feature Extraction Library
dependent packages 9total releases 321latest release November 22, 2023most recent commit 3 months agopypi efel} Downloads
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Bluepyopt ⭐ 190
Blue Brain Python Optimisation Library
dependent packages 7total releases 394latest release October 23, 2023most recent commit 4 months agopypi bluepyopt} Downloads
Fooof ⭐ 307
Parameterizing neural power spectra into periodic & aperiodic components.
dependent packages 5total releases 13latest release September 20, 2023most recent commit 6 months agopypi fooof} Downloads
Spectral_connectivity ⭐ 109
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
dependent packages 3total releases 16latest release July 19, 2023most recent commit 6 months agopypi spectral-connectivity} Downloads
Shybrid ⭐ 9
a graphical tool for generating hybrid ground-truth spiking data for evaluating spike sorting performance
dependent packages 2total releases 8latest release October 20, 2021most recent commit 2 years agopypi shybrid} Downloads
Spectravis ⭐ 38
An interactive web-based neuroscience app for analyzing task-related functional networks over time and frequency
dependent packages 1total releases 1latest release December 07, 2015most recent commit 2 years agonpm spectravis} Downloads
The 10 Latest Releases In Neuroscience Electrophysiology Open Source Projects
Efel ⭐ 60
Electrophys Feature Extraction Library
dependent packages 9total releases 321latest release November 22, 2023most recent commit 3 months agopypi efel} Downloads
Spikeinterface ⭐ 388
A Python-based module for creating flexible and robust spike sorting pipelines.
dependent packages 15total releases 42latest release November 13, 2023most recent commit 17 days agopypi spikeinterface} Downloads
Elephant ⭐ 174
Elephant is the Electrophysiology Analysis Toolkit
dependent packages 14total releases 25latest release November 10, 2023most recent commit 3 months agopypi elephant} Downloads
Spyglass ⭐ 50
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
total releases 11latest release October 23, 2023most recent commit 3 months ago
Bluepyopt ⭐ 190
Blue Brain Python Optimisation Library
dependent packages 7total releases 394latest release October 23, 2023most recent commit 4 months agopypi bluepyopt} Downloads
Fooof ⭐ 307
Parameterizing neural power spectra into periodic & aperiodic components.
dependent packages 5total releases 13latest release September 20, 2023most recent commit 6 months agopypi fooof} Downloads
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Spectral_connectivity ⭐ 109
Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data
dependent packages 3total releases 16latest release July 19, 2023most recent commit 6 months agopypi spectral-connectivity} Downloads
Kilosort ⭐ 382
Fast spike sorting with drift correction for up to a thousand channels
total releases 1latest release January 02, 2023most recent commit a month ago
Shybrid ⭐ 9
a graphical tool for generating hybrid ground-truth spiking data for evaluating spike sorting performance
dependent packages 2total releases 8latest release October 20, 2021most recent commit 2 years agopypi shybrid} Downloads
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