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The Top 23 Docker Singularity Open Source Projects

Open source projects categorized as Docker Singularity
Categories > Virtualization > Docker
Categories > Singularity
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250most recent commit 3 months ago
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53most recent commit 5 months agopypi hpccm} Downloads
Plip ⭐ 320
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
dependent packages 1total releases 25most recent commit 8 months agopypi plip} Downloads
Popper ⭐ 299
Container-native task automation engine.
total releases 19most recent commit 2 years ago
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15most recent commit 3 months ago
Batch Shipyard ⭐ 270
Simplify HPC and Batch workloads on Azure
total releases 15most recent commit a year ago
Docker2singularity ⭐ 266
A docker image for converting docker images to singularity images.
most recent commit 3 months ago
Docker Builds ⭐ 158
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
most recent commit 3 months ago
Sarek ⭐ 126
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
most recent commit 4 years ago
X11vnc Desktop ⭐ 107
Docker/Singularity image for Ubuntu with X11 and VNC
most recent commit 6 months ago
Parse Hipaa ⭐ 84
HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit
most recent commit 3 months ago
Nanopype ⭐ 78
Snakemake pipelines for nanopore sequencing data archiving and processing
most recent commit 2 years ago
Master_of_pores ⭐ 77
Nextflow pipeline for analysis of direct RNA Nanopore reads
most recent commit a year ago
Simplecontainergenerator.jl ⭐ 65
Create container images for using Julia packages (especially useful in environments without Internet access)
most recent commit 2 years ago
Github Ci ⭐ 56
An example GitHub Action (CI) to build a Singularity container
most recent commit a year ago
Wfl ⭐ 45
A Simple Way of Creating Job Workflows in Go running in Processes, Containers, Tasks, Pods, or Jobs
total releases 27most recent commit 4 months ago
Dentist ⭐ 44
Close assembly gaps using long-reads at high accuracy.
total releases 13most recent commit 10 months ago
Gvanno ⭐ 43
Generic human DNA variant annotation pipeline
most recent commit 4 months ago
Lpmx ⭐ 41
A novel composable rootless container system
total releases 14most recent commit 2 years ago
Compss ⭐ 39
COMP Superscalar (COMPSs) is a framework which aims to ease the development and execution of applications for distributed infrastructures, such as Clusters, Grids and Clouds.
most recent commit 4 months ago
Apptainer In Docker ⭐ 31
Apptainer in Docker!
most recent commit 9 months ago
Nf Hack17 Tutorial ⭐ 31
Nextflow basic tutorial for newbie users
most recent commit 6 years ago
Scif ⭐ 30
scientific filesystem: a filesystem organization for scientific software and metadata
total releases 35most recent commit 3 months ago
The 5 Most Depended On Docker Singularity Open Source Projects
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53latest release November 22, 2023most recent commit 5 months agopypi hpccm} Downloads
Clowdr ⭐ 6
Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives
dependent packages 1total releases 45latest release May 20, 2019most recent commit 4 years agopypi clowdr} Downloads
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15latest release October 25, 2022most recent commit 3 months ago
The 10 Latest Releases In Docker Singularity Open Source Projects
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53latest release November 22, 2023most recent commit 5 months agopypi hpccm} Downloads
Wfl ⭐ 45
A Simple Way of Creating Job Workflows in Go running in Processes, Containers, Tasks, Pods, or Jobs
total releases 27latest release October 12, 2023most recent commit 4 months ago
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15latest release October 25, 2022most recent commit 3 months ago
Dentist ⭐ 44
Close assembly gaps using long-reads at high accuracy.
total releases 13latest release September 14, 2022most recent commit 10 months ago
Lpmx ⭐ 41
A novel composable rootless container system
total releases 14latest release April 23, 2022most recent commit 2 years ago
Popper ⭐ 299
Container-native task automation engine.
total releases 19latest release September 08, 2020most recent commit 2 years ago
Helpme ⭐ 7
command line daemon for helping you out
total releases 14latest release May 29, 2020most recent commit 3 years ago
Scif ⭐ 30
scientific filesystem: a filesystem organization for scientific software and metadata
total releases 35latest release January 22, 2020most recent commit 3 months ago
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