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The Top 23 R Diversity Open Source Projects

Open source projects categorized as R Diversity
Vegan ⭐ 399
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
dependent packages 226total releases 87most recent commit 5 months ago
Qiime2r ⭐ 83
Import qiime2 artifacts to R
most recent commit 2 years ago
Divnet ⭐ 77
diversity estimation under ecological networks
most recent commit 7 months ago
Breakaway ⭐ 65
Species richness with high diversity
dependent packages 1total releases 7most recent commit 5 months ago
Amplicon ⭐ 50
Statistics and visualization for amplicon data
most recent commit a year ago
Old Diversity Dashboard ⭐ 49
most recent commit 7 years ago
Inext ⭐ 46
R package for interpolation and extrapolation
most recent commit 2 years ago
Untidydata ⭐ 44
R package of untidy datasets made for the purpose of teaching the tidyverse
most recent commit a year ago
Microbiomeexplorer ⭐ 44
The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or through a Shiny application. Written by Janina Reeder and Joseph N. Paulson.
most recent commit 2 years ago
Metagmisc ⭐ 40
Miscellaneous functions for metagenomic analysis.
most recent commit 3 months ago
Rhea ⭐ 36
A set of R scripts for the analysis of microbial profiles
most recent commit 7 months ago
Awesome Pyladies Blogs ⭐ 34
👩‍💻 Repository with Awesome PyLadies' content
most recent commit 5 months ago
Biodivmapr ⭐ 31
biodivMapR: an R package for α- and β-diversity mapping using remotely-sensed images
most recent commit 5 months ago
Hillr ⭐ 28
An R pakage to calculate diversity through Hill Numbers
dependent packages 1total releases 3most recent commit 8 months ago
Metapop ⭐ 28
A pipeline for the macro- and micro-diversity analyses and visualization of metagenomic-derived populations
most recent commit a year ago
Meetup Presentations_brisbane ⭐ 22
R-Ladies Brisbane Chapter repository of presentations and host toolkit.
most recent commit a year ago
Codyn ⭐ 20
Community dynamics metrics
total releases 9most recent commit 3 years ago
Djvdj ⭐ 19
An R package to analyze single-cell V(D)J data
most recent commit 6 months ago
Paleotree ⭐ 18
R library for analyzing, time-scaling and simulating phylogenies of extinct/fossil lineages. Also plots diversity curves for stratigraphic range data and phylogenies, including combinations of these two data types.
most recent commit 2 years ago
Maize Teo Scripts ⭐ 16
most recent commit 8 years ago
Fgeo ⭐ 16
[Meta R-package on CRAN] Analyse forest diversity and dynamics
total releases 1most recent commit 4 years ago
Diversity ⭐ 16
diveRsity: A comprehensive, general purpose population genetics analysis package.
dependent packages 3total releases 17most recent commit 6 years ago
Fundiv ⭐ 14
Functional diversity and Eveness indexes calculation
most recent commit 5 years ago
The 6 Most Depended On R Diversity Open Source Projects
Vegan ⭐ 399
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
dependent packages 226total releases 87latest release October 11, 2022most recent commit 5 months ago
Entropart ⭐ 6
Entropy Partitioning to Measure Diversity
dependent packages 4total releases 26latest release September 26, 2023most recent commit 9 months ago
Diversity ⭐ 16
diveRsity: A comprehensive, general purpose population genetics analysis package.
dependent packages 3total releases 17latest release April 04, 2017most recent commit 6 years ago
Daisie ⭐ 9
DAISIE
dependent packages 2total releases 11latest release October 21, 2023most recent commit 6 months ago
Hillr ⭐ 28
An R pakage to calculate diversity through Hill Numbers
dependent packages 1total releases 3latest release March 02, 2021most recent commit 8 months ago
Breakaway ⭐ 65
Species richness with high diversity
dependent packages 1total releases 7latest release November 22, 2022most recent commit 5 months ago
The 10 Latest Releases In R Diversity Open Source Projects
Daisie ⭐ 9
DAISIE
dependent packages 2total releases 11latest release October 21, 2023most recent commit 6 months ago
Entropart ⭐ 6
Entropy Partitioning to Measure Diversity
dependent packages 4total releases 26latest release September 26, 2023most recent commit 9 months ago
Rasterdiv ⭐ 12
Diversity Indices for Numerical Matrices
total releases 8latest release November 24, 2022most recent commit 5 months ago
Breakaway ⭐ 65
Species richness with high diversity
dependent packages 1total releases 7latest release November 22, 2022most recent commit 5 months ago
Vegan ⭐ 399
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
dependent packages 226total releases 87latest release October 11, 2022most recent commit 5 months ago
Raceland ⭐ 9
Pattern-Based, Zoneless Method for Analysis and Visualization of Racial Topography
total releases 9latest release February 11, 2022most recent commit a year ago
Rbiom ⭐ 7
Interact with Biological Observation Matrix files.
total releases 3latest release November 05, 2021most recent commit 3 months ago
Hillr ⭐ 28
An R pakage to calculate diversity through Hill Numbers
dependent packages 1total releases 3latest release March 02, 2021most recent commit 8 months ago
Codyn ⭐ 20
Community dynamics metrics
total releases 9latest release December 01, 2020most recent commit 3 years ago
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