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The Top 11 Differential Gene Expression Open Source Projects

Open source projects categorized as Differential Gene Expression
Categories > Differential Gene Expression
Pipeline Transcriptome De ⭐ 95
Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
most recent commit a year ago
Psichomics ⭐ 33
Interactive R package to quantify, analyse and visualise alternative splicing
most recent commit 4 months ago
Workshop Rnaseq ⭐ 30
Workshop • Analysis of RNA-seq data
most recent commit 8 months ago
Asap ⭐ 24
ASAP : Automated Single-cell Analysis Pipeline
most recent commit 5 months ago
Idea ⭐ 23
Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)
most recent commit 2 years ago
Glmmseq ⭐ 15
Gene-level general linear mixed model
total releases 2most recent commit 2 years ago
Glmmseq ⭐ 15
Gene-level general linear mixed model
total releases 6most recent commit 2 years ago
Dea.r ⭐ 11
Script to automate differential expression analysis using DESeq2, edgeR or limma-voom
most recent commit 6 years ago
Iggeneusage ⭐ 6
Comparison of gene usage in immune repertoires under different biological conditions
most recent commit 4 months ago
Curare ⭐ 6
Curare - A customizable and reproducible analysis pipeline for RNA-Seq experiments
total releases 5most recent commit 6 months ago
Genexvis ⭐ 5
An application for exploring and visualizing differential gene expression data created with DESeq2
most recent commit 2 years ago
The 3 Latest Releases In Differential Gene Expression Open Source Projects
Curare ⭐ 6
Curare - A customizable and reproducible analysis pipeline for RNA-Seq experiments
total releases 5latest release November 16, 2023most recent commit 6 months ago
Glmmseq ⭐ 15
Gene-level general linear mixed model
total releases 6latest release October 08, 2022most recent commit 2 years ago
Glmmseq ⭐ 15
Gene-level general linear mixed model
total releases 2latest release March 30, 2021most recent commit 2 years ago
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