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The Top 8 Matlab Calcium Imaging Open Source Projects

Open source projects categorized as Matlab Calcium Imaging
Categories > Calcium Imaging
Caiman Matlab ⭐ 236
Complete Matlab pipeline for large scale calcium imaging data analysis
most recent commit 10 months ago
Normcorre ⭐ 132
Matlab routines for online non-rigid motion correction of calcium imaging data
most recent commit 2 years ago
Ciatah ⭐ 77
CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
most recent commit 4 months ago
Flow_registration ⭐ 17
Flow-Registration toolbox for 2P motion compensation
most recent commit 5 months ago
Sid ⭐ 14
Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)
most recent commit 4 years ago
Hnccorr ⭐ 13
HNCcorr algorithm for neuron identification in calcium imaging datasets.
total releases 4most recent commit a year ago
Graft Analysis ⭐ 10
This repository contains code for morphology-free analysis of functional fluorescence microscopy. The focal algorithm, Graph-Filtered Time-trace (GraFT) Dictionary Learning, is published in Charles et al. 2022 in the IEEE Transactions of Image Processing.
most recent commit 6 months ago
Finderspiker ⭐ 7
Signal Processing Toolbox for Calcium Imaging Data
most recent commit 5 months ago
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