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The Top 14 C Plus Plus Graph Genome Open Source Projects

Open source projects categorized as C Plus Plus Graph Genome
Categories > Programming Languages > C Plus Plus
Categories > Science > Genome
Vg ⭐ 1,022
tools for working with genome variation graphs
most recent commit 3 months ago
Hifiasm ⭐ 443
Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
most recent commit 3 months ago
Arcs ⭐ 86
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
most recent commit 5 months ago
Minia ⭐ 65
Minia is a short-read assembler based on a de Bruijn graph
most recent commit 6 months ago
Cuttlefish ⭐ 64
Building the compacted de Bruijn graph efficiently from references or reads.
most recent commit a year ago
W2rap Contigger ⭐ 44
An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.
most recent commit a year ago
Argweaver ⭐ 28
Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)
most recent commit 9 years ago
Mhc Prg ⭐ 28
Population Reference Graphs for the HLA and MHC.
most recent commit 5 years ago
Blastfrost ⭐ 23
most recent commit 3 years ago
Maffer ⭐ 17
extract MSAs from genome variation graphs
most recent commit 4 years ago
Debruijn ⭐ 14
de Bruijn graph construction tool
most recent commit 9 years ago
Jumbodb ⭐ 9
De Bruijn graph construction for large k.
most recent commit 3 years ago
Bubbz ⭐ 8
most recent commit 4 years ago
Multi Genome Reference ⭐ 6
A program to generate a graph which presents a simplified representation of several full length genomes
most recent commit 6 years ago
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