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The Top 16 Bioinformatics Gwas Open Source Projects

Open source projects categorized as Bioinformatics Gwas
Categories > Data Processing > Bioinformatics
Categories > Gwas
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146most recent commit 3 months agopypi hail} Downloads
Gwa_tutorial ⭐ 184
A comprehensive tutorial about GWAS and PRS
most recent commit 4 years ago
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38most recent commit a year ago
Tiledb Vcf ⭐ 79
Efficient variant-call data storage and retrieval library using the TileDB storage library.
most recent commit 3 months ago
Geneticsmakie.jl ⭐ 66
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
most recent commit 3 months ago
Mungesumstats ⭐ 59
Rapid standardisation and quality control of GWAS or QTL summary statistics
most recent commit 3 months ago
Gor ⭐ 37
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
most recent commit 4 months ago
Gwas2vcf ⭐ 37
Convert GWAS summary statistics to VCF
most recent commit a year ago
Snpsea ⭐ 23
📊 Identify cell types and pathways affected by genetic risk loci.
most recent commit 4 years ago
Genamap ⭐ 22
Visual Machine Learning of Genome-Phenome Associations
most recent commit 4 years ago
Echolocator ⭐ 20
Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
most recent commit a year ago
Sumstatsrehab ⭐ 20
GWAS summary statistics files QC tool
most recent commit 2 years ago
Kgwasflow ⭐ 19
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
most recent commit 7 months ago
Cataloguer ⭐ 12
Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
most recent commit a year ago
Faster_lmm_d ⭐ 12
A faster lmm for GWAS. Supports GPU backend.
most recent commit 5 years ago
Baghera ⭐ 6
Bayesian Gene Heritability Analysis from GWAS summary statistics
most recent commit 2 years ago
The 2 Latest Releases In Bioinformatics Gwas Open Source Projects
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146latest release October 30, 2023most recent commit 3 months agopypi hail} Downloads
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38latest release May 20, 2022most recent commit a year ago
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