Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 19 Machine Learning Data Science Bioinformatics Open Source Projects

Open source projects categorized as Machine Learning Data Science Bioinformatics
Categories > Data Processing > Bioinformatics
Categories > Data Processing > Data Science
Categories > Machine Learning > Machine Learning
Dash ⭐ 19,976
Data Apps & Dashboards for Python. No JavaScript Required.
dependent packages 639total releases 174most recent commit 5 months agopypi dash} Downloads
Scanpy ⭐ 1,768
Single-cell analysis in Python. Scales to >1M cells.
dependent packages 440total releases 77most recent commit 2 months agopypi scanpy} Downloads
Anndata ⭐ 518
Annotated data.
dependent packages 399total releases 78most recent commit 15 days agopypi anndata} Downloads
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18most recent commit 8 months agopypi redun} Downloads
Dance ⭐ 284
DANCE: A Deep Learning Library and Benchmark Platform for Single-Cell Analysis
total releases 4most recent commit 5 months ago
Cellrank ⭐ 279
CellRank: dynamics from multi-view single-cell data
dependent packages 4total releases 32most recent commit 6 months agopypi cellrank} Downloads
Deep Rules ⭐ 198
Ten Quick Tips for Deep Learning in Biology
most recent commit 3 years ago
Pandora ⭐ 127
PANDORA Advanced Machine Learning for Data Integration, Analysis, and Insightful Discoveries in Health and Disease 💻
most recent commit 8 months ago
Tutorial ⭐ 94
Tutorials on machine learning, artificial intelligence, data science with math explanation and reusable code (in python and R)
most recent commit 6 months ago
Glycowork ⭐ 46
Package for processing and analyzing glycans and their role in biology.
dependent packages 1total releases 9most recent commit 7 months agopypi glycowork} Downloads
Liblevenshtein Java ⭐ 40
Various utilities regarding Levenshtein transducers. (Java)
dependent packages 10total releases 4most recent commit 6 years ago
Kg4sl ⭐ 25
Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network (GNN)-based model that uses knowledge graph for SL prediction.
most recent commit a year ago
Ai For Bio ⭐ 21
A free and collaborative space for Machine Learning applied to Biology
most recent commit 6 months ago
Biolitmap ⭐ 16
Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.
most recent commit 5 years ago
Orbitalfeatures ⭐ 13
A sparsity aware implementation of "Biological Network Comparison Using Graphlet Degree Distribution" (Bioinformatics 2007)
most recent commit 2 years ago
Mbpls ⭐ 10
(Multiblock) Partial Least Squares Regression for Python
dependent packages 2total releases 15most recent commit 4 years agopypi mbpls} Downloads
Youtube ⭐ 9
Collection of YouTube videos on data science on the Data Professor YouTube channel.
most recent commit 3 years ago
Pilsl ⭐ 6
PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer drug targets. It learns the representation of pairwise interaction between two genes from a knowledge graph (KG).
most recent commit a year ago
Seqdata ⭐ 5
Annotated sequence data
most recent commit 6 months ago
The 8 Most Depended On Machine Learning Data Science Bioinformatics Open Source Projects
Dash ⭐ 19,976
Data Apps & Dashboards for Python. No JavaScript Required.
dependent packages 639total releases 174latest release November 28, 2023most recent commit 5 months agopypi dash} Downloads
Scanpy ⭐ 1,768
Single-cell analysis in Python. Scales to >1M cells.
dependent packages 440total releases 77latest release October 31, 2023most recent commit 2 months agopypi scanpy} Downloads
Anndata ⭐ 518
Annotated data.
dependent packages 399total releases 78latest release October 31, 2023most recent commit 15 days agopypi anndata} Downloads
Liblevenshtein Java ⭐ 40
Various utilities regarding Levenshtein transducers. (Java)
dependent packages 10total releases 4latest release May 29, 2016most recent commit 6 years ago
Cellrank ⭐ 279
CellRank: dynamics from multi-view single-cell data
dependent packages 4total releases 32latest release November 27, 2023most recent commit 6 months agopypi cellrank} Downloads
Mbpls ⭐ 10
(Multiblock) Partial Least Squares Regression for Python
dependent packages 2total releases 15latest release October 30, 2018most recent commit 4 years agopypi mbpls} Downloads
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18latest release November 12, 2023most recent commit 8 months agopypi redun} Downloads
Glycowork ⭐ 46
Package for processing and analyzing glycans and their role in biology.
dependent packages 1total releases 9latest release August 27, 2023most recent commit 7 months agopypi glycowork} Downloads
The 9 Latest Releases In Machine Learning Data Science Bioinformatics Open Source Projects
Dance ⭐ 284
DANCE: A Deep Learning Library and Benchmark Platform for Single-Cell Analysis
total releases 4latest release December 04, 2023most recent commit 5 months ago
Dash ⭐ 19,976
Data Apps & Dashboards for Python. No JavaScript Required.
dependent packages 639total releases 174latest release November 28, 2023most recent commit 5 months agopypi dash} Downloads
Cellrank ⭐ 279
CellRank: dynamics from multi-view single-cell data
dependent packages 4total releases 32latest release November 27, 2023most recent commit 6 months agopypi cellrank} Downloads
Redun ⭐ 464
Yet another redundant workflow engine
dependent packages 1total releases 18latest release November 12, 2023most recent commit 8 months agopypi redun} Downloads
Scanpy ⭐ 1,768
Single-cell analysis in Python. Scales to >1M cells.
dependent packages 440total releases 77latest release October 31, 2023most recent commit 2 months agopypi scanpy} Downloads
Anndata ⭐ 518
Annotated data.
dependent packages 399total releases 78latest release October 31, 2023most recent commit 15 days agopypi anndata} Downloads
Glycowork ⭐ 46
Package for processing and analyzing glycans and their role in biology.
dependent packages 1total releases 9latest release August 27, 2023most recent commit 7 months agopypi glycowork} Downloads
Mbpls ⭐ 10
(Multiblock) Partial Least Squares Regression for Python
dependent packages 2total releases 15latest release October 30, 2018most recent commit 4 years agopypi mbpls} Downloads
Liblevenshtein Java ⭐ 40
Various utilities regarding Levenshtein transducers. (Java)
dependent packages 10total releases 4latest release May 29, 2016most recent commit 6 years ago
Popular Data Processing Categories
Jupyter Notebook
Dataset
Sql
Validation
Pipeline
Translation
Data Science
Classification
Transaction
Scraper
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.