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The Top 302 Alignment Open Source Projects on Github
Categories
>
Data Processing
>
Alignment
Pandas
⭐
31,059
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
Ffsubsync
⭐
5,004
Automagically synchronize subtitles with video.
Prnet
⭐
4,042
Joint 3D Face Reconstruction and Dense Alignment with Position Map Regression Network (ECCV 2018)
3ddfa_v2
⭐
1,706
The official PyTorch implementation of Towards Fast, Accurate and Stable 3D Dense Face Alignment, ECCV 2020.
Aeneas
⭐
1,649
aeneas is a Python/C library and a set of tools to automagically synchronize audio and text (aka forced alignment)
Tabulate
⭐
812
Table Maker for Modern C++
Deca
⭐
621
DECA: Detailed Expression Capture and Animation
Alignedcollectionviewflowlayout
⭐
614
A collection view layout that gives you control over the horizontal and vertical alignment of the cells.
Aligntab
⭐
606
An alignment plugin for Sublime Text using regular expression
Mmseqs2
⭐
553
MMseqs2: ultra fast and sensitive search and clustering suite
Alass
⭐
486
"Automatic Language-Agnostic Subtitle Synchronization"
Cmu Multimodalsdk
⭐
446
CMU MultimodalSDK is a machine learning platform for development of advanced multimodal models as well as easily accessing and processing multimodal datasets.
Face Landmark
⭐
420
caffe 68 points face-landmark
Wtdbg2
⭐
401
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Seqan
⭐
399
SeqAn's official repository.
Head Pose Estimation
⭐
395
Real-time head pose estimation built with OpenCV and dlib
Flutter_page_transition
⭐
332
This is Flutter Page Transition Package
Mesh_mesh_align_plus
⭐
317
Precisely align, move, and measure+match objects and mesh parts in your 3D scenes.
Openvtuber
⭐
308
虚拟爱抖露(アイドル)共享计划, 是基于单目RGB摄像头的人眼与人脸特征点检测算法, 在实时3D面部捕捉以及模型驱动领域的应用.
Robust_point_cloud_registration
⭐
287
Robust Point Cloud Registration Using Iterative Probabilistic Data Associations ("Robust ICP")
Hh Suite
⭐
260
Remote protein homology detection suite.
Smartsystemmenu
⭐
258
SmartSystemMenu extends system menu of all windows in the system
Face Everthing
⭐
255
face detection alignment recognition reconstruction ...
Realsr
⭐
236
Toward Real-World Single Image Super-Resolution: A New Benchmark and A New Model (ICCV 2019)
Genomeworks
⭐
235
SDK for GPU accelerated genome assembly and analysis
Ngmlr
⭐
230
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
Pedestrian_alignment
⭐
227
TCSVT2018 Pedestrian Alignment Network for Large-scale Person Re-identification
Core Layout
⭐
216
Flexbox & CSS-style Layout in Swift.
Rmsd
⭐
208
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
Scan2cad
⭐
203
[CVPR'19] Dataset and code used in the research project Scan2CAD: Learning CAD Model Alignment in RGB-D Scans
Subaligner
⭐
201
Automatically synchronize and translate subtitles with pretrained deep neural networks, forced alignments and transformers. https://subaligner.readthedocs.io/
Mtcnn Accelerate Onet
⭐
199
MTCNN Face Detection & Alignment
Vcf2phylip
⭐
142
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
Blasr
⭐
127
BLASR: The PacBio® long read aligner
Sortmerna
⭐
112
SortMeRNA: next-generation sequence filtering and alignment tool
Strings
⭐
111
A set of useful functions for transforming strings.
Fstalign
⭐
91
An efficient OpenFST-based tool for calculating WER and aligning two transcript sequences.
Buddysuite
⭐
88
Bioinformatics toolkits for manipulating sequence, alignment, and phylogenetic tree files
Sibeliaz
⭐
88
A fast whole-genome aligner based on de Bruijn graphs
Astroalign
⭐
87
A tool to align astronomical images based on asterism matching
Vertical Rhythm
⭐
82
Put some typographical vertical rhythm in your CSS. LESS, Stylus and SCSS/SASS versions included.
Fair.m
⭐
79
Flexible Algorithms for Image Registration
Atom Aligner
⭐
78
Easily align multi-line with support for different operators and custom configurations
Faciallandmark_caffe
⭐
70
Facial Landmark Detection with Caffe CNN. Face alignment avaiable.
Rail
⭐
70
Scalable RNA-seq analysis
Beautifyr
⭐
70
RStudio addin for formatting Rmarkdown tables
Align
⭐
70
A general purpose application and library for aligning text.
Traffic Shm
⭐
66
traffic-shm (Anna) is a Java based lock free IPC library.
Softalignments
⭐
65
Neural macine translation soft alignment visualisations for web and command line
Jqcollectionviewalignlayout
⭐
63
A custom layout object based on flow layout. Added supports for horizontal, vertical alignment and RTL direction of collection view items.(available for both UICollectionView and NSCollectionView)
Edit Distance
⭐
62
Python library for computing edit distance between arbitrary Python sequences.
Facexlib
⭐
59
FaceXlib aims at providing ready-to-use face-related functions based on current STOA open-source methods.
Lambda
⭐
59
LAMBDA – the Local Aligner for Massive Biological DatA
Mtcnn
⭐
57
face detection and alignment with mtcnn
Unity Aligntools
⭐
54
Align Tools is just perfect Unity asset plugin to align gui object
Visualqc
⭐
51
VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
Dtan
⭐
51
Official PyTorch implementation for our NeurIPS 2019 paper, Diffeomorphic Temporal Alignment Nets. TensorFlow\Keras version is available at tf_legacy branch.
Raptor
⭐
50
Graph-based mapping of long sequences, noisy or HiFi.
Cmpgpx
⭐
49
Show the differences between GPX files
Dtwalign
⭐
48
Comprehensive dynamic time warping module for python
Unsupervisedrr
⭐
47
[CVPR 2021 - Oral] UnsupervisedR&R: Unsupervised Point Cloud Registration via Differentiable Rendering
Groot
⭐
43
A resistome profiler for Graphing Resistance Out Of meTagenomes
Fluentdna
⭐
43
FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.
Metagraph
⭐
43
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
Goalign
⭐
42
Goalign is a set of command line tools and an API to manipulate multiple alignments. It is implemented in Go language.
Faciallandmark_mxnet
⭐
39
Facial landmarks training by mxnet(gluon). Use for face alignment and so on.
Rticonbutton
⭐
39
A Interface Builder configurable UIButton with a image icon
Reveal
⭐
39
Graph based multi genome aligner
Tracy
⭐
38
Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Mtcnn_tf
⭐
37
MTCNN implement by tensorflow. Easy to training and testing.
Direct Io
⭐
32
Direct IO helpers for block devices and regular files on FreeBSD, Linux, macOS and Windows.
Figma Measure
⭐
31
A plugin to add measurement lines
Ma
⭐
31
The Modular Aligner and The Modular SV Caller
Block Aligner
⭐
30
SIMD-accelerated library for computing global and X-drop affine gap sequence alignments using an adaptive block-based algorithm.
Cath Tools
⭐
29
Protein structure comparison tools such as SSAP and SNAP
Autosynch
⭐
29
Automated lyrics-to-audio alignment using syllabic nuclei detection. Developed during Google Summer of Code 2019.
Lyrics To Audio Alignment
⭐
28
Aligns text (lyrics) with monophonic singing voice (audio). The algorithm uses structural segmentation to segment the audio into structures and then uses hidden markov models to obtain alignment within segments. The final alignment is concatenation of time stamps of lyrics within the segments for each song.
Needleman Wunsch
⭐
28
Interactive Visualization of Needleman-Wunsch Algorithm in Javascript
Colorify
⭐
27
Colorify - C# .Net Console Library with Text Format: colors, alignment and lot more [ Win+Mac+Linux ]
Hlaminer
⭐
27
⛏HLA predictions from NGS shotgun data
Pblat
⭐
26
parallelized blat with multi-threads support
Payment_alipay
⭐
25
odoo alipay module
Unicode_display_width
⭐
25
Displayed width of UTF-8 strings in Modern C++
Sina
⭐
24
SINA - Reference based multiple sequence alignment
Soap3 Dp
⭐
24
To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS), most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously.
Spatialalignment
⭐
24
Helpful components for aligning and keeping virtual objects aligned with the physical world.
Facenet Caffe
⭐
24
facenet recognition and retrieve by using hnswlib and flask, convert tensorflow model to caffe
Alignmentduration
⭐
23
Lyrics-to-audio-alignement system. Based on Machine Learning Algorithms: Hidden Markov Models with Viterbi forced alignment. The alignment is explicitly aware of durations of musical notes. The phonetic model are classified with MLP Deep Neural Network.
Alp Baselines
⭐
22
Baselines for anchor link prediction (including MNA, PALE, IONE, FINAL, FRUI-P, CROSSMNA, REGAL)
Cacao
⭐
22
Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer
Lxmwaterfalllayout
⭐
22
A collectionViewLayout layout cells like waterfall, which add the missing collectionViewHeader and collectionViewFooter
Flightlayout
⭐
22
An alternative layout framework, a balanced medium between manual layout and auto layout. Great for calculating frames with FlightAnimator!!
Peppa Facial Landmark Pytorch
⭐
21
Facial Landmark Detection based on PyTorch
Nanoseq
⭐
21
Nanopore demultiplexing, QC and alignment pipeline
Indigo
⭐
20
Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
Covtobed
⭐
20
covtobed | Convert the coverage track from a BAM file into a BED file
Alignment Nf
⭐
18
Whole Exome/Whole Genome Sequencing alignment pipeline
Mrivis
⭐
18
medical image visualization library and development toolkit
Wochenende
⭐
17
A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3
Opal
⭐
17
SIMD C/C++ library for massive optimal sequence alignment (local/SW, infix, overlap, global)
1-100 of 302 projects
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📦 60
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📦 55
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📦 97
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📦 96
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📦 375
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📦 26
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📦 70
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📦 68
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📦 57
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📦 127
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📦 45
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📦 131
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📦 310
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📦 29
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📦 68
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📦 38
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📦 25
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📦 194
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