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79 search results found
Brms
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1,198
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
Rstan
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983
RStan, the R interface to Stan
Bda_r_demos
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538
Bayesian Data Analysis demos for R
Rstanarm
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371
rstanarm R package for Bayesian applied regression modeling
Statsexpressions
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303
Tidy data frames and expressions with statistical summaries 📜
Shinystan
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181
shinystan R package and ShinyStan GUI
Nimble
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142
The base NIMBLE package for R
Ggmcmc
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106
Graphical tools for analyzing Markov Chain Monte Carlo simulations from Bayesian inference
Projpred
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106
Projection predictive variable selection
Rexamples
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103
worked R examples
Parbayesianoptimization
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88
Parallelizable Bayesian Optimization in R
Laplacesdemon
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77
A complete environment for Bayesian inference within R
Bactdating
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70
Bayesian inference of ancestral dates on bacterial phylogenetic trees
Bayesian Basics
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61
🚫 ↩️ A document that introduces Bayesian data analysis.
Dirichletprocess
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53
Build dirichletprocess objects for data analysis
Statsr
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49
Companion package for the Coursera Statistics with R specialization
Geostan
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48
Bayesian spatial analysis
Causact
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42
causact: R package to accelerate computational Bayesian inference workflows in R through interactive visualization of models and their output.
Bas
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41
BAS R package https://merliseclyde.github.io/BAS/
Babette
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40
babette is an R package to work with BEAST2
Bssm
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37
Bayesian Inference of State Space Models
Bbsbayes
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30
An R Package for Hierarchical Bayesian Analysis of North American Breeding Bird Survey Data
Netbid
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28
Data-driven Network-based Bayesian Inference of Drivers
Tmbstan
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27
Sigfit
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27
Flexible Bayesian inference of mutational signatures
Bvartools
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27
Functions for Bayesian inference of vector autoregressive and vector error correction models
Metabma
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26
Bayesian Model Averaging for Random and Fixed Effects Meta-Analysis
Bayeshmm
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26
Full Bayesian Inference for Hidden Markov Models
Clonealign
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25
Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data
Lgpr
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24
R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for inferring covariate effects and assessing covariate relevances. Various models can be specified using a convenient formula syntax.
Psci 3300 Political Science Research
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23
Course Content for PSCI 3300 Political Science Research Methods
Bitfam
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23
BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021) https://genome.cshlp.org/content/31/7/1296 for details.
Summer
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22
SAE Unit/area Models and Methods for Estimation in R
Modelacion Bayesiana
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22
Notas y contenido del curso en Modelación Bayesiana para la MCD @ ITAM
Brmstools
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22
Helper functions for brmsfit objects (DEPRECATED)
Inlautils
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22
R package providing utilities for INLA
Bayesian_workshop
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21
Material for a Bayesian statistics workshop
Dynamite
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19
Bayesian Inference of Complex Panel Data
Riskyr
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18
A toolbox for rendering risk literacy more transparent
Datascience
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17
My data science projects, in Python and R, about statistical learning and Bayesian inference.
Ggdistribute
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15
ggplot2 extension for plotting distributions
Statistics For Ecologists Master Courses
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15
The material for a course on Statistics for ecologists I teach every year to Master students.
Debinfer
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14
Bayesian inference for dynamical models of biological systems in R
Scmet
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14
Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
Assignr
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14
R package for geographic assignment
Fmcmc
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13
A friendly MCMC framework
Laplacesdemon
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13
A complete environment for Bayesian inference within R
Scr Stan
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11
Spatial capture-recapture models in Stan
Vimure
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11
Variational Inference for Multiply-Reported social network data https://doi.org/10.1093/jrsssa/qnac004
Melissa
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10
Bayesian Clustering and Imputation of Single Cell Methylomes
Bgvars
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10
Bayesian Inference for Global Vector Autoregressive (GVAR) and Global Vector Error Correction (GVEC) Models
Bayesnec
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9
Bayesian No-Effect-Concentration estimation in R
Stancon2020
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8
Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"
Piranha
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8
Scripts for file processing and analysis in phylogenetics and phylogeography
Bayesianreasoning
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8
R package with functions to plot and help understand Positive and Negative Predictive Values, and their relationship with Sensitivity, Specificity and Prevalence.
Shinybrms
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7
An R package providing a GUI ('shiny' app) for the R package 'brms'.
Bayesian Statistics Project
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7
Project for the Bayesian Statistics exam at University of Trieste
Bdrc
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7
Fits a discharge rating curve based on the power-law and the generalized power-law from data on paired water elevation and discharge measurements in a given river using a Bayesian hierarchical model as described in Hrafnkelsson et al. (2022)
Bayesian Pape
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7
Introduction to rstanarm
Greta.lme
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7
a greta extension for hierarchical models
Mobility
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7
An R package containing functions for parsing mobility data, fitting models using Bayesian inference, and simulating mobility patterns.
Undecided Voters Us Pres Elections
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6
Data and code for "Polling bias and undecided voter allocations: US Presidential elections, 2004 - 2016"
Ppcseq
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6
Probabilistic outlier identification for bulk RNA sequencing data
Bcda
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6
This R package is a set of tools for Bayesian analysis of categorical data, specifically 2×2 contingency tables.
Rlda
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6
Bayesian Bricks
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6
Basic building blocks in Bayesian statistics.
Rhddmjags
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6
Repository for example Hierarchical Drift Diffusion Model (HDDM) code using JAGS in R. These scripts provide useful examples for using JAGS with R2jags, the JAGS Wiener module, mixture modeling in JAGS, and Bayesian diagnostics in R.
Ffp
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6
Fully Flexible Probabilities for Stress-Testing and Portfolio Construction
Uci_covid_modeling
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6
Multievent_jags_r
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6
Fit multievent capture-recapture models in R (maximum-likelihood), Nimble and JAGS (Bayesian)
Fitr
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6
Functions for model fitting and inference
Baker
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6
👩🍳 🥧 Bayesian Analysis Kit for Etiology Research via Nested Partially Latent Class Models
Statmodeling
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5
Workshop Materials "Advanced Bayesian Statistical Modeling in R and Stan "
Laplacesdemon
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5
A complete environment for Bayesian inference within R
Pareben
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5
Parallel Implementations of the Empirical Bayesian Elastic Net Cross-Validation in R
Vibass
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5
R-package for the introductory course on Bayesian inference at the València International Bayesian Summer School
Epiilmct
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5
Continuous Time Distance-Based and Network-Based Individual Level Models for Epidemics
Multilevelcoda
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5
multilevelcoda R package for Bayesian compositional multilevel modelling
Mortality Statsmodel
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5
Mortality using bayesian hierarchical modelling
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