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551 search results found

Monai ⭐ 4,679

AI Toolkit for Healthcare Imaging

Qasystemonmedicalkg ⭐ 4,527

A tutorial and implement of disease centered Medical knowledge graph and qa system based on it。知识图谱构建，自动问答，基于kg的自动问答。以疾病为中心的一定规模医药领域知识图谱，并以该知识

Huatuo Llama Med Chinese ⭐ 3,657

Repo for BenTsao [original name: HuaTuo (华驼)], Instruction-tuning Large Language Models with Chinese Medical Knowledge. 本草（原名：华驼）模型仓库，基于中文医学知识的大语言模型指令微调

Segloss ⭐ 2,870

A collection of loss functions for medical image segmentation

Unetplusplus ⭐ 1,974

[IEEE TMI] Official Implementation for UNet++

Torchio ⭐ 1,827

Medical imaging toolkit for deep learning

3dunetcnn ⭐ 1,677

Pytorch 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

Medicalnet ⭐ 1,648

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

Ssl4mis ⭐ 1,595

Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.

Medicalgpt ⭐ 1,549

MedicalGPT: Training Your Own Medical GPT Model with ChatGPT Training Pipeline. 训练医疗大模型，实现了包括增量预训练、有监督微调、RLHF(奖励建模、强化学习训练)和DPO(直接偏

Deep Learning Toolkit for Medical Image Analysis

Mnssp3 ⭐ 1,272

Medicaldetectiontoolkit ⭐ 1,209

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Niftynet ⭐ 1,170

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

Attention Gated Networks ⭐ 1,099

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Unet Family ⭐ 1,029

Paper and implementation of UNet-related model.

Paperai ⭐ 1,020

📄 🤖 Semantic search and workflows for medical/scientific papers

Medicalzoopytorch ⭐ 896

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

Medmnist ⭐ 818

[pip install medmnist] 18 MNIST-like Datasets for 2D and 3D Biomedical Image Classification

Medicaltorch ⭐ 724

A medical imaging framework for Pytorch

A set of common support code for medical imaging, surgical navigation, and related purposes.

Xrayglm ⭐ 577

🩺 首个会看胸部X光片的中文多模态医学大模型 | The first Chinese Medical Multimodal Model that Chest Radiographs Summarization.

Pytorch Medical Segmentation ⭐ 536

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

Invesalius3 ⭐ 521

3D medical imaging reconstruction software

Innereye Deeplearning ⭐ 509

Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

Med Chatglm ⭐ 462

Repo for Chinese Medical ChatGLM 基于中文医学知识的ChatGLM指令微调

Deepreg ⭐ 442

Medical image registration using deep learning

Medical image processing in Python

Bcdu Net ⭐ 435

BCDU-Net : Medical Image Segmentation

Nndetection ⭐ 434

nnDetection is a self-configuring framework for 3D (volumetric) medical object detection which can be applied to new data sets without manual intervention. It includes guides for 12 data sets that were used to develop and evaluate the performance of the proposed method.

Vnet.pytorch ⭐ 421

A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation

Recurrent (conditional) generative adversarial networks for generating real-valued time series data.

Chinese Nlp Corpus ⭐ 378

Collections of Chinese NLP corpus

A framework for high-performance medical image processing, neural network inference and visualization

Medical Concept Annotation Tool

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

Insight ⭐ 331

INSIGHT is an autonomous AI that can do medical research!

Brainstorm ⭐ 300

Implementation of "Data augmentation using learned transforms for one-shot medical image segmentation"

Neurite ⭐ 295

Neural networks toolbox focused on medical image analysis

Self Supervised Fewshot Medical Image Segmentation ⭐ 281

[ECCV'20] Self-supervision with Superpixels: Training Few-shot Medical Image Segmentation without Annotation (code&data-processing pipeline)

Quickumls ⭐ 279

System for Medical Concept Extraction and Linking

🏥 Medical Text Mining and Information Extraction with spaCy

Vertical Medical ⭐ 246

Open Source Healthcare System for Odoo

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Ceal Medical Image Segmentation ⭐ 239

Active Deep Learning for Medical Imaging Segmentation

Doctor Friende ⭐ 237

Rasa-Doctor-Friende.A chinese medical chatbot based on Neo4j knowledge graph and Rasa.

Medqa Chatglm ⭐ 235

🛰️ 基于真实医疗对话数据在ChatGLM上进行LoRA、P-Tuning V2、Freeze、RLHF等微调，我们的眼光不止于医疗问答

Medicalnamedentityrecognition ⭐ 219

Medical Named Entity Recognition implement using bi-directional lstm and crf model with char embedding.CCKS2017中文电子病例命名实体识别项目,主要实现使用了基于字向量的四层双向

Graph-based Attention Model

Chineseblue ⭐ 212

Chinese Biomedical Language Understanding Evaluation benchmark (ChineseBLUE)

Deepehr ⭐ 193

Chronic Disease Prediction Using Medical Notes

Doctorai ⭐ 192

Repository for Doctor AI project

Paperetl ⭐ 191

📄 ⚙️ ETL processes for medical and scientific papers

Python Mindwave ⭐ 187

Python scripts to interface with the Neurosky Mindwave EEG Headset

Multiplanarunet ⭐ 179

Multi-Planar UNet for autonomous segmentation of 3D medical images

Cnn 3d Images Tensorflow ⭐ 176

3D image classification using CNN (Convolutional Neural Network)

Embeddings ⭐ 175

Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"

Multi Scale Attention ⭐ 166

Code for our paper "Multi-scale Guided Attention for Medical Image Segmentation"

Generative adversarial network for generating electronic health records.

Medical Entity Recognition ⭐ 161

包含传统的基于统计模型(CRF)和基于深度学习(Embedding-Bi-LSTM-CRF)下的医疗

Ivadomed ⭐ 150

Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.

Itkelastix ⭐ 150

An ITK Python interface to elastix, a toolbox for rigid and nonrigid registration of images

Grand Challenge.org ⭐ 150

A platform for end-to-end development of machine learning solutions in biomedical imaging

Medsynthesisv1 ⭐ 147

This is a copy of package for medical image synthesis work with LRes-ResUnet and GAN (wgan-gp) in pytorch framework

Medical Dialogue System ⭐ 142

Vnet Tensorflow ⭐ 140

Implementation of vnet in tensorflow for medical image segmentation

U2net_torch ⭐ 137

MICCAI2019:3D U$^2$-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation

Miccai Lits2017 ⭐ 137

liver segmentation using deep learning

Isic Archive Downloader ⭐ 133

A script to download the ISIC Archive of lesion images

Nasunet ⭐ 132

Self Supervised 3d Tasks ⭐ 131

best effort anonymization for medical images using python

Kaapana ⭐ 120

Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging.

Active Contour Loss ⭐ 117

Implementation of active contour loss function

Atten_deep_mil ⭐ 117

Attention-based Deep MIL implementation and application

Medicaldataaugmentationtool ⭐ 114

RETAIN: Interpretable Predictive Model in Healthcare using Reverse Time Attention Mechanism

Covid Dialogue ⭐ 110

Fuse Med Ml ⭐ 110

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

Character Bert ⭐ 109

Main repository for "CharacterBERT: Reconciling ELMo and BERT for Word-Level Open-Vocabulary Representations From Characters"

Hyperdensenet ⭐ 106

This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.

Domain Generalization via Model-Agnostic Learning of Semantic Features

Medical_ner_crfsuite ⭐ 102

基于条件随机场的医疗电子病例的命名实体识别

Code of DDcGAN for infrared and visible image fusion and medical image fusion

Mritopng ⭐ 101

A simple python module to make it easy to batch convert DICOM files to PNG images.

Resunetplusplus ⭐ 99

Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation) (IEEE ISM)

Phiseg Code ⭐ 97

Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019

3d Ru Net ⭐ 94

A SlidingWindow-Free Accurate and Fast 3D Medical Image Segmentation Framework

Basic_unet_example ⭐ 93

An example project of how to use a U-Net for segmentation on medical images with PyTorch.

Depressionai ⭐ 92

Alexa skill for people suffering with depression.

Knowledgegraph_ner ⭐ 90

中文医学知识图谱命名实体识别，包括bi-LSTM+CRF，transformer+CRF等模型

EDS-NLP provides a set of spaCy components to extract information from clinical notes written in French.

Domain_specific_cl ⭐ 89

Code for NeurIPS 2020 article "Contrastive learning of global and local features for medical image segmentation with limited annotations"

Our regulatory documentation manager. Streamlines 62304, 14971, and 510(k) documentation for software projects.

MedType: Improving Medical Entity Linking with Semantic Type Prediction

Cnnbasedmedicalsegmentation ⭐ 83

Code for reproducing the results of our paper on CNN-based medical image segmentation

Medicalchatbot ⭐ 82

Medical-domain Dialogue System for Diseases Identification

Medtagger ⭐ 82

A collaborative framework for annotating medical datasets using crowdsourcing.

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