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Search results for python mcmc
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python
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184 search results found
Pymc
⭐
7,799
Bayesian Modeling in Python
Numpyro
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1,887
Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.
Emcee
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1,361
The Python ensemble sampling toolkit for affineinvariant MCMC
Fastfm
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955
fastFM: A Library for Factorization Machines
Bda_py_demos
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851
Bayesian Data Analysis demos for Python
Bayespy
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666
Bayesian Python: Bayesian inference tools for Python
Scipy2014_tutorial
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281
Tutorial: Bayesian Statistical Analysis in Python
Sampyl
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277
MCMC samplers for Bayesian estimation in Python, including MetropolisHastings, NUTS, and Slice
Recommend
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269
recommendation system with python
Data_science_blogs
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232
A repository to keep track of all the code that I end up writing for my blog posts.
Pygpgo
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214
Bayesian optimization for Python
Mici
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202
Manifold Markov chain Monte Carlo methods in Python
Zeus
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197
⚡️ zeus: Lightning Fast MCMC ⚡️
Probabilistic Models
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196
Collection of probabilistic models and inference algorithms
Openmmtools
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190
A batteriesincluded toolkit for the GPUaccelerated OpenMM molecular simulation engine.
Exoplanet
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187
Fast & scalable MCMC for all your exoplanet needs!
Minimc
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171
Just a little MCMC
Best
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141
Bayesian estimation supersedes the t test
Flowmc
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130
Normalizingflow enhanced sampling package for probabilistic inference in Jax
Gerrychain
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117
Use MCMC to analyze districting plans and gerrymanders
Paramonte
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112
ParaMonte: Plain Powerful Parallel Monte Carlo and MCMC Library for Python, MATLAB, Fortran, C++, C.
Getdist
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112
MCMC sample analysis, kernel densities, plotting, and GUI
Prscs
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109
Polygenic prediction via continuous shrinkage priors
Kcbo
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94
A Bayesian testing framework written in Python.
Pythonmcmc
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82
A list of Pythonbased MCMC & ABC packages
Phylowgs
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78
Application for inferring subclonal composition and evolution from wholegenome sequencing data.
Stochopy
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74
Python library for stochastic numerical optimization
Geobipy
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69
Geophysical Bayesian Inference in Python. Docs:
Vip
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67
VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through highcontrast imaging.
Starfish
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60
Tools for Flexible Spectroscopic Inference
Uqtk
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56
Sandia Uncertainty Quantification Toolkit
Pyautofit
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54
PyAutoFit: Classy Probabilistic Programming
Radvel
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54
General Toolkit for Modeling Radial Velocity Data
Espei
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52
Fitting thermodynamic models with pycalphad  https://doi.org/10.1557/mrc.2019.59
Anesthetic
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51
Nested Sampling postprocessing and plotting
Pymcmcstat
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49
Python implementation of MATLAB toolbox "mcmcstat"
Bdapy
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45
Reproducing plots of Bayesian Data Analysis (Gelman et al, 3rd Edition) in Python
Bmcmc
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45
MCMC package for Bayesian data analysis
Prscsx
⭐
44
Crosspopulation polygenic prediction
Abyes
⭐
43
A Python package for Bayesian A/B Testing
Webmc3
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43
A web interface for exploring PyMC3 traces
Littlemcmc
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40
A lightweight and performant implementation of HMC and NUTS in Python, spun out of the PyMC project.
Pocomc
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39
pocoMC: A Python implementation of Preconditioned Monte Carlo for accelerated Bayesian Computation
Prism
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38
An alternative to MCMC for rapid analysis of models
Wavelet Flow
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38
Wavelet Flow: Fast Training of High Resolution Normalizing Flows
Aemcmc
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37
AeMCMC is a Python library that automates the construction of samplers for Aesara graphs representing statistical models.
Carma_pack
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36
MCMC Sampler for Performing Bayesian Inference on Continuous Time Autoregressive Models.
Bayesian Hmm
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35
A nonparametric Bayesian approach to Hidden Markov Models
Flowket
⭐
33
A framework based on Tensorflow for running variational MonteCarlo simulations of quantum manybody systems.
Bayes Skopt
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32
A fully Bayesian implementation of sequential modelbased optimization
Sg_mcmc
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31
Implementation of Stochastic Gradient MCMC algorithms
Aehmc
⭐
31
An HMC/NUTS implementation in Aesara
Naima
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31
Derivation of nonthermal particle distributions through MCMC spectral fitting
Mc3
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29
Python MCMC Sampler
Hydrology
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28
Using Python for developing hydrological models and remote sensing workflow.
Ptmcmcsampler
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28
Parallel tempering MCMC sampler package written in Python
Posts
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26
Pieces of code that have appeared on my blog with a focus on stochastic simulations.
Schist
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26
An interface for Nested Stochastic Block Model for single cell analysis
Agnfitter
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25
SEDfitting code for AGN and galaxies from a MCMC approach
Inference Tools
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25
Python tools for Bayesian data analysis
Stark
⭐
24
Experimenting with Stan on Spark for distributed MCMC
Pysgmcmc
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23
Stochastic Gradient MCMC Methods for Tensorflow
Pgbart
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23
Particle Gibbs for Bayesian Additive Regression Trees
Bayhunter
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23
McMC transdimensional Bayesian inversion of surface wave dispersion and receiver functions
Python_for_bayes
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23
「Pythonによるベイズ統計学入門」の正誤表とPythonコード
Mocat
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23
All things Monte Carlo, written in JAX.
Pypgmc
⭐
20
PyPGMC: Fast discrete inference submodels for PyMC and PyMC3
Autoreparam
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20
Automatic Reparameterisation of Probabilistic Programs
Coopnets
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19
Cooperative Learning of EnergyBased Model and Latent Variable Model via MCMC Teaching
Alaamee
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19
Autologistic Actor Attribute Model (ALAAM) parameter estimation, simulation, and goodnessoffit
Nnest
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18
Neural network nested and MCMC sampling
Tweetopic
⭐
18
Blazing fast topic modelling for short texts.
Examples
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18
example projects
Sganinv
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18
Multiplepoint geostatistics inversion of reservoir models using spatial generative adversarial networks
Simplemc
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17
Updated version of a simple MCMC code for cosmological parameter estimation where only expansion history matters.
Generalised Gaussian Processes
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17
Fully Bayesian Inference in GPs  Gaussian and Generic Likelihoods
Markov Chain Monte Carlo Mcmc
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16
Markov Chain Monte Carlo MCMC methods are implemented in various languages (including R, Python, Julia, Matlab)
Bnpc
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16
Bayesian nonparametric clustering (BnpC) of binary data with missing values and uneven error rates
Cosmohammer
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16
Cosmological parameter estimation with the MCMC Hammer, please use https://cosmogitlab.phys.ethz.ch/cosmo/CosmoHamme this repository is outdated ! Docs at http://cosmodocs.phys.ethz.ch/cosmoHammer/
Treecat
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15
A Bayesian latent tree model of highdimensional heterogeneous data
3dmmdepthfitting
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15
Efficient 3D Morphable Model Face Fitting using Depth Sensing Technologies
Gess
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14
An MCMC algorithm for sampling continuous probability distributions in parallel
Probability_and_statistics
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14
Course materials for PROBABILITY AND STATISTICS A/B
Pmslice Python
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14
PseudoMarginal Slice Sampling
Mimo
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13
A toolbox for inference of mixture models
Epos
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13
Exoplanet Population Observation Simulator
Pdspy
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13
pdspy: MCMC for Monte Carlo Dust Radiative Transfer Modeling
Starvine
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12
Tools to construct canonical and regular vines. StarVine can also be used as a bivariate copula fitting tool.
Auxiliaryvariationalmcmc
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12
Code required to reproduce the experiments in Auxiliary Variational MCMC
Pymcmc
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12
Python MCMC
Pymc Multilevel Example
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12
Example Multilevel Model in PyMC
Pippi
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12
Pippi: parse it, plot it. A program for operating on MCMC chains and related lists of samples from a function or distribution.
Samcnet
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12
Bayesian model averaging of an objective function over a model class using advanced MCMC techniques.
Mccpy
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11
Монте Карло изчисления с Python
Xspec_emcee
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11
Use EMCEE to do MCMC analyses of spectra in XSPEC
Radex_emcee
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10
RADEX+emcee, LVG modeling with an MCMC approach, used in arXiv: 1709.04740
Bibat
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10
A batteriesincluded template for Bayesian data analysis projects
Pyxspeccorner
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10
A Python tool to make interactive Corner Plots based on XSPEC MCMC chains saved to FITS files.
Covid19uk
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10
Girth_mcmc
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9
Bayesian IRT submodule for GIRTH
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