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Search results for matlab segmentation

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SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

Evalsaliency ⭐ 13

A tookbox for evaluating salient object detection algorithms

Finegrained Cvpr2014 ⭐ 13

Nonparametric part-transfer for fine-grained recognition

Image Segmentation Using Genetic Algorithm ⭐ 13

Project in class Computational Intelligence Methods

Tridfusion ⭐ 13

TriDFusion (3DF) Medical Imaging Viewer

Source code for palmprint segmentation and ROI extraction used in the IEEE TIFS 2019 and IEEE CIVEMSA 2019 papers

Multilabel Unet ⭐ 12

Multi-label Cloud Segmentation Using a Deep Network

Spm_auto_reorient ⭐ 12

A few routines to perform "auto reorient" in SPM

Deepem3d ⭐ 12

Segment axon and myelin from microscopy data. Written in Matlab.

Gmm Hmrf ⭐ 12

GMM-Based Hidden Markov Random Field for Color Image and 3D Volume Segmentation

Piecewise Flat Embedding for Image Segmentation

Overlapping Cell Nuclei Segmentation Using Dbn ⭐ 11

Code accompanying our ICVGIP 2016 paper

An API and GUI application for semi-automated interactive segmentation of medical images.

Fundus Vessel Segmentation Tmbe ⭐ 11

One of the first steps in automatic fundus image analysis is the segmentation of the retinal vasculature, which provides valuable information related to several diseases. In this work, we present an extensive description and evaluation of our method for blood vessel segmentation in fundus images based on a discriminatively trained, fully connected conditional random field model. This task remains a challenge largely due to the desired structures being thin and elongated, a setting that performs

Texture Segmentation Lbp Vs Glcm ⭐ 11

a Matlab Image segmentation via several feature spaces DEMO

Kernelcut ⭐ 11

Deconvnet_analysis ⭐ 11

Code for "Salient Deconvolutional Networks, Aravindh Mahendran, Andrea Vedaldi, ECCV 2016"

Heart Sounds Segmentation ⭐ 11

Heart sounds segmentation based on LSTM neural network and Fourier Synchrosqueezed Transform.

Phantast Fiji ⭐ 11

Repository for the FIJI/ImageJ implementation of the phase contrast microscopy segmentation toolbox (PHANTAST)

Clothing Co Parsing Label Tool ⭐ 11

An ugly tool for labeling segmentations given images and the corresponding superpixels.

Semi automated image analysis toolkit for Connectomics

Image To Region Adjacency Graph Creation ⭐ 11

Convertion of an RGB image to a Region Adjacency Graph (RAG) using SLIC super-pixel based segmentation technique.

Af Graph ⭐ 11

Source code for the paper "Affinity Fusion Graph-based Framework for Natural Image Segmentation".

Sonar Image Segmentation Through Entropy Method ⭐ 11

This is a MATLAB implementation of Sonar Image Segmentation via Entropy Method

Domain Adaptation for Semantic Segmentation at Nighttime

Music Structure Analysis In Matlab ⭐ 10

🎼 music segmentation in audio domain

Motion Segmentation ⭐ 10

Brainseg ⭐ 10

Train fully convonlutional neural networks for brain segmentation.

Dataset and Evaluation Scripts for Obstacle Detection via Semantic Segmentation in a Marine Environment

Some_specular_detection_and_inpainting_methods_for_endoscope_image ⭐ 10

Octsegmentation ⭐ 10

Reference Code for the publication "Probabilistic Intra-Retinal Layer Segmentation in 3-D OCT Images Using Global Shape Regularization" (see http://www.sciencedirect.com/science/article/pii/S

Traffic Vehicle Recognition System ⭐ 10

A summer project using neural network toolbox in MATLAB for differentiating toll paying vehicles and toll-exempted travellers.

Deep Sudoku Solver ⭐ 10

Find and solve sudoku puzzles in images using deep learning and computer vision

Code for MICCAI 2017 paper on binary sparse convolutions for semantic segmentation of medical images

Segmentation Of Mri Brain Images For Tumor Detection ⭐ 9

Breast Cancer Detection Using Artificial Neural Networks ⭐ 9

Matlab based GUI to predict breast cancer using Deep Learning

A MATLAB implementation of the texture segmentation method in paper: "A factorization based active contour model for texture segmentation", IEEE International Conference on Image Processing (ICIP 2016).

Submarkov Random Walk For Image Segmentation ⭐ 9

SubMarkov Random Walk for Image Segmentation

Pyramidcnn ⭐ 9

A Pyramid CNN for Dense-Leaves Segmentation

Trafficdetection ⭐ 9

We implement a system for vehicle detection and tracking from traffic video using Gaussian mixture models and Bayesian estimation. The system provides robust foreground segmentation of moving vehicles through a K-means clustering approximation as well as vehicle tracking correspondence between frames by correlating Kalman and particle filters.

Rgbd Object Propsal ⭐ 9

M_heracles ⭐ 9

HERitAge by point CLoud procESsing for Matlab

Color Image Segmentation Using Region Growing And Region Merging ⭐ 9

Unsupervised color image segmentation using Region Growing and Region Merging

Salient Region with Affinity Propagation Clustering

Bayesianquicknat ⭐ 8

Trained Models and Deployment code for segmentation and Quality Control of whole-brain segmentation of MRI T1 scans

Brain Tumor Classification And Detection Machine Learning ⭐ 8

Refining the Accuracy and Efficiency to classify brain tumor images into malignant and benign using Matlab

Multi Layer Rpca ⭐ 8

Method Multi-Layer Robust Principal Component Analysis. This method was introduced in the paper Camera-Trap Images Segmentation using Multi-Layer Robust Principal Component Analysis

Multi-Layer Random Forest, with Circularity Features, for Image Segmentation

Image Segmentation With Snake Active Contour Algorithm ⭐ 8

Image Segmentation with Snake (Active Contour) Algorithm

Supervoxel-based Segmentation of 3D Volumetric Images

Segmentation ⭐ 8

Buildings segmentation and multiple sclerosis lesions segmentation (Dictionary learning, Encoding, Classification)

Superpixel Brain Segmentation ⭐ 8

Work related to research done over Summer 2014. Uses the SLIC superpixel algorithm to segment ADNI MRI images, and attempt to learn features based off that segmentation.

Highorderlosses_eccv2014 ⭐ 8

Implementation of ECCV 2014 paper "Perceptually Inspired Layout-aware Losses for Image Segmentation"

Cytology_dataset ⭐ 8

Cervix93 Cytology Dataset and the Baseline Method

2016_class_activation_mapping ⭐ 8

semantic segmentation in MATLAB

Toolbox for IBP Coupled SPCM-CRP Hidden Markov Model. Also contains code for EM-based HMM learning and inference for Bayesian non-parametric HDP-HMM and IBP-HMM.

Pf_segmentation ⭐ 8

Efficient graph-based image segmentation

3d 2d Fcn ⭐ 8

3D-2D FULLY Convoltional Network For Medical Organ( e.g. Liver) Segmentation

Demo_fusionnet ⭐ 8

Demonstration of FusionNet for touchless palmprint and finger texture recognition. Based on the source code for the 2019 IEEE CIVEMSA paper "Touchless palmprint and finger texture recognition: A Deep Learning fusion approach"

ADJUST: A Dictionary-Based Joint Reconstruction and Unmixing Method for Spectral Tomography

Videocoseg_msg ⭐ 7

The Matlab code for Video Co-saliency via Multi-state Selection Graph

Oct_preprocess ⭐ 7

OCT preprocessing: Fully Convolutional Boundary Regression for Retina OCT Segmentation

Topic Random Field ⭐ 7

Implementation of "Image Segementation with Topic Random Field" by Zhao, Fei-fei, and Xing.

Sr Clustering ⭐ 7

Segmentation of events in egocentric lifelogging videos.

3d Cell Nuclei Denoising And Segmentation ⭐ 7

A novel generic dictionary-based denoising method for improving noisy and densely packed nuclei segmentation in 3D time-lapse fluorescence microscopy images

A MATLAB implementation of the HMRF as described in "Segmentation of Brain MR Images Through a Hidden Markov Random Field Model and the Expectation-Maximization Algorithm" (Zhang et al., 2001). The HMRF is used to segment images from the cross-sectional OASIS-brains dataset

Choroidsegmentation ⭐ 7

Open-source algorithm for automatic choroid segmentation of OCT volume reconstructions. This software was developed by the HMR Biophotonics Lab, Hospital Maisonneuve-Rosemont, Montreal, Quebec, Canada (biophotonics.ca). It is open source and it was released under the GNU GENERAL PUBLIC LICENSE v3. It is only for research purposes. The algorithm is described in the paper "Open-source algorithm for automatic choroid segmentation of OCT volume reconstructions", Javier Mazzaferri, Luke Beaton, Gisèl

Semanticlabelingtool ⭐ 7

Tool to create ground truth semantic segmentation masks using super pixels

Implementation of Aligned Cluster Analysis

Openbreast ⭐ 7

Digital mammography processing tools

Deep Autocontext Segmentation ⭐ 7

A combined of deep learned and auto-context features used for object segmentation.

Pixelclassifier ⭐ 7

A single-layer Random Forest model for pixel classification (image segmentation).

Lightfieldsuperpixels ⭐ 7

Repository for the ICCV 2019 paper: View-consistent 4D Light Field Superpixel Segmentation, by Khan et al.

Chan Vese Model ⭐ 7

A MATLAB implementation of Chan-Vese model for image segmentation, using the idea proposed by Chan and Vese.

Single Cell Segmentation

Unbiasedshapecompactness ⭐ 7

This repository contains the code employed in our work: "Unbiased Shape Compactness for segmentation"

Cell Segmentation Methods Comparison ⭐ 7

Matlab implementation of several methods for cell detection and cell segmentation

Bbox_from_segmentation ⭐ 7

generate single object rotated bounding box from binary segmentation mask (supplementary code for VOT Challenge data generation)

Advanced Medical Image Processing ⭐ 7

A package for all projects of Medical Image processing at Vanderbilt (papers are in google drive)

Causal Video Object Segmentation

Bfscore_python ⭐ 7

Boundary F1 Score - Python Implementation

Phase Unwrapping ⭐ 6

Phase unwrapping using deep learning

Semantic Motion Segmentation Using Optical Flow And Convolutional Neural Networks ⭐ 6

Semantic Motion Segmentation using Optical flow and Convolutional Neural Networks

Spm12 Dartel ⭐ 6

Preprocessing of functional and structural MRI data into standardized MNI space using SPM12 and DARTEL.

Tools and techniques (Matlab/C) for low-level image processing

Supervoxel Gerrymandering ⭐ 6

Source code implementation for "Video Object Segmentation using Supervoxel-Based Gerrymandering."

Unsupervised_disparity_map_segmentation ⭐ 6

Road Damage Detection Based on Unsupervised Disparity Map Segmentation (T-ITS)

Matconvnet Calvin ⭐ 6

Fast R-CNN implementation for Matconvnet. Also includes end-to-end region based semantic segmentation.

Confocalgn ⭐ 6

Generates simulated confocal data from a ground truth signal

Phantast Matlab ⭐ 6

Repository for the MATLAB implementation of the phase contrast microscopy segmentation toolbox (PHANTAST)

C.elegans Nuclear Image Processing ⭐ 6

This repository contains the segmentation program and classification details.

Slic_for_hyperspectral_images ⭐ 6

This set of files contains the Matlab code for the SLIC segmentation on the hyperspectral images.

Iris Recognition Ots Dnn ⭐ 6

Source codes and models for the ICB 2019 paper: Iris Recognition with Image Segmentation Employing Retrained Off-the-Shelf Deep Neural Networks

Shadow_free_segmentation ⭐ 6

MATLAB implementation of the shadow free segmentation algorithm from the ICCP14 paper

Matlab code for image segmentation by Fuzzy Connectedness

Image Segmentation By Correlation Clustering ⭐ 6

This is the project that we did for the Computer Vision course at Stony Brook University. It is a learning based method where the number of clusters do not have to be specified from the beginning. Image Segmentation by Correlation Clustering gave us extremely good results with Boundary displacement Error as low as 4.85 compared to 10.81 in the work "Higher-Order Correlation Clustering for Image Segmentation"

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