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Search results for c plus plus mcmc
c-plus-plus
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mcmc
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48 search results found
Mcmc
⭐
143
A C++ library of Markov Chain Monte Carlo (MCMC) methods
Nimble
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142
The base NIMBLE package for R
Cmdstanr
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126
CmdStanR: the R interface to CmdStan
Paramonte
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112
ParaMonte: Plain Powerful Parallel Monte Carlo and MCMC Library for Python, MATLAB, Fortran, C++, C.
Uqtk
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62
Sandia Uncertainty Quantification Toolkit
Cogaps
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53
Bayesian MCMC matrix factorization algorithm
Torsten
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50
library of C++ functions that support applications of Stan in Pharmacometrics
Bali Phy
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42
Bayesian co-estimation of phylogenies and multiple alignments via MCMC
Bayesforecast
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38
Automatic forecasting and Bayesian modeling for time series with Stan
Bssm
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37
Bayesian Inference of State Space Models
Carma_pack
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36
MCMC Sampler for Performing Bayesian Inference on Continuous Time Autoregressive Models.
Cppbugs
⭐
30
c++ version of BUGS
Covidestim
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25
Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
Stateline
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22
Distributed Markov Chain Monte Carlo
Emu
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21
An Expectation-Maximization algorithm to infer mutational signatures
Bayesmix
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20
Flexible Bayesian nonparametric mixture models in C++
Dnest3
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20
Diffusive Nested Sampling
Scicone
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20
Single-cell copy number calling and event history reconstruction.
Baylib
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20
Parallel library for approximate inference on discrete Bayesian networks
Deploid
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18
dEploid is designed for deconvoluting mixed genomes with unknown proportions. Traditional ‘phasing’ programs are limited to diploid organisms. Our method modifies Li and Stephen’s algorithm with Markov chain Monte Carlo (MCMC) approaches, and builds a generic framework that allows haloptype searches in a multiple infection setting.
Rjmcmcmt
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17
Reversible jump Markov Chain Monte Carlo inversion of magnetotelluric data
Rcppbugs
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16
R interface for CppBugs
Cudahm
⭐
15
Routines for using CUDA to perform MCMC Sampling of Hierarchical Models with GPUs.
Selection
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13
Meshed
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11
Meshed GP for Bayesian spatial big data regression
Fastdtm
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10
Repo for MCMC based Dynamic Topic Model
Mcmc
⭐
10
The MCMC hammer algorithm using C++
Collapsedsbm
⭐
10
MCMC algorithm for the collapsed Stochastic Block Model
Bayesgrowth
⭐
9
Estimate fish growth using MCMC analysis
Egg
⭐
9
Emulator Generation Gadget
Sbm_canonical_mcmc
⭐
9
C++ implementation of a MCMC sampler for the (canonical) SBM
Scalable Variational Bayesian Factorization Machine
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8
Scalable Variational Bayesian inference algorithm for FM is developed which converges faster than the existing state-of-the-art MCMC based inference algorithm. Additionally, a stochastic variational Bayesian algorithm for FM is introduced for large scale learning which utilizes SGD.
Bmagwa
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8
Bayesian variable selection and model averaging in genome-wide association analysis
Bnn
⭐
7
Bayesian neural networks trained with MCMC methods, implemented in TensorFlow and C++
Swiftlink
⭐
7
Parallel MCMC linkage analysis
Mcmc_clib
⭐
7
c program for simplified manifold MALA sampling of ODE model parameters
Bipartitesbm Mcmc
⭐
7
C++ implementation of a MCMC sampler for the (microcanonical) bipartite SBM
Bammsc
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7
Mcmc
⭐
7
Minimalist (C) Client for Memcached
Fetching
⭐
7
Fetching is an implementation of parallel predictive prefetching for Metropolis-Hastings. Prefetching algorithms use speculative execution to parallelize MCMC.
Moire
⭐
7
MOI and Allele Frequency Recovery from Noisy Polyallelic Genetics Data
Scm
⭐
6
C++ MCMC sampler for the Simplicial Configuration Model
Ima2p
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6
IMa2p is a parallel implementation of IMa2, using OpenMPI-C++ - a Bayesian MCMC based method for inferring population demography under the IM (Isolation with Migration) model.
Mcmc Denoising
⭐
6
Bayesian image denoising in C++ and Python
Hawkesinf
⭐
6
Xspec_emcee
⭐
6
Reimplementation of the MCMC algorithm emcee in XSPEC
Exchanger
⭐
5
Bayesian Entity Resolution with Exchangeable Random Partition Priors
Msmpathfinder
⭐
5
Finding pathways from an Markov State Model
Nrmm.cpp
⭐
5
MCMC inference algorithms for normalized random measure mixtures
Mcmc
⭐
5
Simple and basic implementation of MCMC-MH and sudoku solver using mcmc.
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