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Search results for golang bioinformatics

bioinformatics x

14 search results found

Scipipe ⭐ 1,010

Robust, flexible and resource-efficient pipelines using Go and the commandline

A language and runtime for distributed, incremental data processing in the cloud

A cross-platform, efficient and practical CSV/TSV toolkit in Golang

A cross-platform command-line tool for executing jobs in parallel

A Go package for engineering organisms.

Awesome ⭐ 565

Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.

Arvados ⭐ 354

An open source platform for managing and analyzing biomedical big data

Vcfanno ⭐ 334

annotate a VCF with other VCFs/BEDs/tabixed files

Taxonkit ⭐ 306

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

Philosopher ⭐ 104

A complete toolkit for shotgun proteomics data analysis

A lightweight and high-performance bioinformatics package in Golang

Goenrich ⭐ 68

GO enrichment with python -- pandas meets networkx

Awesome Scientific Go ⭐ 62

Go libraries for scientific computing

Gosemsim ⭐ 52

⛳ GO-terms Semantic Similarity Measures

Mmseqs2 App ⭐ 44

MMseqs2 app to run on your workstation or servers

Gnparser ⭐ 35

GNparser normalises scientific names and extracts their semantic elements.

a pileup library that embraces the huge

Gonetics ⭐ 30

Go / Golang Bioinformatics Library

Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

SQL-like query language for the SAM/BAM file format

Burrows-Wheeler Transform and FM-index in golang

Golang for Bioinformatics

Yet Another CWL Engine by Golang

Gnverifier ⭐ 16

GNverifier verifies scientific names against more than 100 biodiversity databases

gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API server for both local and remote server.

CWL (and input file) parser for Golang, used by github.com/otiai10/yacle

Command-line interface for Cromwell server

Biobtree ⭐ 13

A bioinformatics tool to search, map and retrieve identifiers, keywords and attributes

miscellaneous script-like stuff in go for bioinformatics

Unique sequence search by K-mer exclusion

Bystro Vcf ⭐ 8

Extremely fast Variant Call Format annotation

Needleman-Wunsch Alignment in Go

Crypt4GH standard implementation

Go Rosalind ⭐ 5

A Go (golang) package for solving bioinformatics problems.

Query language for bioinformatic data

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1-14 of 14 search results

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