Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 18 Vcf Files Open Source Projects

Open source projects categorized as Vcf Files
Categories > Vcf Files
Vcf2phylip ⭐ 216
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
most recent commit 10 months ago
Learning_vcf_file ⭐ 122
Learning the Variant Call Format
most recent commit 7 months ago
Gcp Variant Transforms ⭐ 114
GCP Variant Transforms
most recent commit 2 years ago
Rvtests ⭐ 95
Rare variant test software for next generation sequencing data
most recent commit 3 years ago
Snpgenie ⭐ 94
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
most recent commit 8 months ago
Mungesumstats ⭐ 59
Rapid standardisation and quality control of GWAS or QTL summary statistics
most recent commit 3 months ago
Vcfstats ⭐ 48
Powerful statistics for VCF files
total releases 15most recent commit 6 months ago
Vcf Simplify ⭐ 45
A python parser to simplify and build the VCF (Variant Call Format).
most recent commit 3 years ago
Phenomenet Vp ⭐ 17
A phenotype-based tool for variant prioritization in WES and WGS data
most recent commit 4 years ago
Starfish ⭐ 17
Intersect multiple VCF files with haplotype awareness
most recent commit 3 years ago
Spark Vcf ⭐ 15
Spark VCF data source implementation for Dataframes
most recent commit 2 years ago
Virheat ⭐ 9
Visualize microbial evolution at the SNP level!
total releases 10most recent commit 5 months ago
Cate ⭐ 8
A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
most recent commit 6 months ago
Variantcallformat.jl ⭐ 8
Read and write VCF and BCF files
most recent commit 10 months ago
Bamdash ⭐ 6
create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks
most recent commit 4 months ago
Ebt ⭐ 6
Evolutionary Bioinformatics Toolkit (EBT)
most recent commit 4 years ago
Mobicnv ⭐ 6
CNV analysis based on the depth of coverage of Illumina data
most recent commit 6 months ago
Plot Vcf ⭐ 5
visual analysis of your VCF files
most recent commit a year ago
The 2 Latest Releases In Vcf Files Open Source Projects
Virheat ⭐ 9
Visualize microbial evolution at the SNP level!
total releases 10latest release November 17, 2023most recent commit 5 months ago
Vcfstats ⭐ 48
Powerful statistics for VCF files
total releases 15latest release September 27, 2023most recent commit 6 months ago
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.