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The Top 23 Singularity Open Source Projects

Open source projects categorized as Singularity
Categories > Singularity
Singularity ⭐ 2,495
Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.
total releases 18most recent commit 2 years ago
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250most recent commit 3 months ago
Apptainer ⭐ 808
Apptainer: Application containers for Linux
total releases 36most recent commit 3 months ago
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53most recent commit 4 months agopypi hpccm} Downloads
Plip ⭐ 320
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
dependent packages 1total releases 25most recent commit 8 months agopypi plip} Downloads
Popper ⭐ 299
Container-native task automation engine.
total releases 19most recent commit 2 years ago
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15most recent commit 3 months ago
Batch Shipyard ⭐ 270
Simplify HPC and Batch workloads on Azure
total releases 15most recent commit a year ago
Docker2singularity ⭐ 266
A docker image for converting docker images to singularity images.
most recent commit 3 months ago
Docker Builds ⭐ 158
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
most recent commit 3 months ago
Sarek ⭐ 126
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
most recent commit 4 years ago
X11vnc Desktop ⭐ 107
Docker/Singularity image for Ubuntu with X11 and VNC
most recent commit 6 months ago
Sregistry ⭐ 100
server for storage and management of singularity images
most recent commit 7 months ago
Singularity Hpc ⭐ 96
Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.
total releases 65most recent commit 4 months ago
Singularity Cri ⭐ 93
The Singularity implementation of the Kubernetes Container Runtime Interface
most recent commit 3 years ago
Oneapi Containers ⭐ 93
most recent commit 5 months ago
Parse Hipaa ⭐ 84
HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit
most recent commit 3 months ago
Nanopype ⭐ 78
Snakemake pipelines for nanopore sequencing data archiving and processing
most recent commit 2 years ago
Master_of_pores ⭐ 77
Nextflow pipeline for analysis of direct RNA Nanopore reads
most recent commit a year ago
Wlm Operator ⭐ 75
Singularity implementation of k8s operator for interacting with SLURM.
total releases 3most recent commit 3 years ago
Simplecontainergenerator.jl ⭐ 65
Create container images for using Julia packages (especially useful in environments without Internet access)
most recent commit 2 years ago
Github Ci ⭐ 56
An example GitHub Action (CI) to build a Singularity container
most recent commit 10 months ago
Naked Singularity ⭐ 56
A repository of definition files for bootstrapping Singularity containers around the software applications, frameworks, and libraries you need to run on high-performance computing systems.
most recent commit 3 months ago
The 9 Most Depended On Singularity Open Source Projects
Singularity Cli ⭐ 54
streamlined singularity python client (spython) for singularity
dependent packages 34total releases 85latest release November 23, 2023most recent commit 4 months agopypi spython} Downloads
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Sregistry Cli ⭐ 14
Singularity Global Client for container management
dependent packages 10total releases 26latest release July 01, 2022most recent commit 10 months ago
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53latest release November 22, 2023most recent commit 4 months agopypi hpccm} Downloads
Singularity ⭐ 54
A extremely fast ioc container for high performance applications
dependent packages 2total releases 171latest release September 14, 2020most recent commit 4 years agonuget Singularity} Downloads
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15latest release October 25, 2022most recent commit 3 months ago
Singularity ⭐ 9
NodeJS framework for services
dependent packages 1total releases 4latest release May 25, 2018most recent commit 5 years agonpm singularityjs} Downloads
Clowdr ⭐ 6
Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives
dependent packages 1total releases 45latest release May 20, 2019most recent commit 4 years agopypi clowdr} Downloads
The 10 Latest Releases In Singularity Open Source Projects
Lxm3 ⭐ 6
LXM3: XManager launch backend for HPC clusters
total releases 6latest release December 01, 2023most recent commit 3 months ago
Nextflow ⭐ 2,447
A DSL for data-driven computational pipelines
dependent packages 16total releases 250latest release November 24, 2023most recent commit 3 months ago
Singularity Cli ⭐ 54
streamlined singularity python client (spython) for singularity
dependent packages 34total releases 85latest release November 23, 2023most recent commit 4 months agopypi spython} Downloads
Hpc Container Maker ⭐ 419
HPC Container Maker
dependent packages 2total releases 53latest release November 22, 2023most recent commit 4 months agopypi hpccm} Downloads
Apptainer ⭐ 808
Apptainer: Application containers for Linux
total releases 36latest release November 22, 2023most recent commit 3 months ago
Wfl ⭐ 45
A Simple Way of Creating Job Workflows in Go running in Processes, Containers, Tasks, Pods, or Jobs
total releases 27latest release October 12, 2023most recent commit 4 months ago
Hoomd Blue ⭐ 298
Molecular dynamics and Monte Carlo soft matter simulation on GPUs.
dependent packages 1total releases 15latest release October 25, 2022most recent commit 3 months ago
Expfactory ⭐ 32
software to generate a reproducible container with a battery of experiments
total releases 203latest release October 04, 2022most recent commit 2 years ago
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