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The Top 11 Sequencing Sam Open Source Projects

Open source projects categorized as Sequencing Sam
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78most recent commit 4 months ago
Hts ⭐ 115
biogo high throughput sequencing repository
dependent packages 71total releases 16most recent commit 8 months ago
Samstat ⭐ 20
SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.
most recent commit 9 months ago
Samql ⭐ 20
SQL-like query language for the SAM/BAM file format
most recent commit 7 months ago
Npscarf ⭐ 19
most recent commit 4 years ago
Pheniqs ⭐ 16
Fast and accurate sequence demultiplexing
most recent commit 2 years ago
Freehic ⭐ 8
FreeHi-C pipeline for high fidelity Hi-C data simulation.
most recent commit 3 years ago
Ruby Htslib ⭐ 7
HTSlib bindings for Ruby
total releases 19most recent commit 3 months ago
Seqkit ⭐ 7
Toolkit for manipulating FASTA and SAM files
most recent commit a year ago
Cplate ⭐ 7
Digestion template-based deconvolution for chromatin structure inference.
most recent commit 8 years ago
Debreak ⭐ 5
Structural variant caller for real-time long-read sequencing data
most recent commit 2 years ago
The 2 Most Depended On Sequencing Sam Open Source Projects
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78latest release October 13, 2023most recent commit 4 months ago
Hts ⭐ 115
biogo high throughput sequencing repository
dependent packages 71total releases 16latest release August 21, 2022most recent commit 8 months ago
The 4 Latest Releases In Sequencing Sam Open Source Projects
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78latest release October 13, 2023most recent commit 4 months ago
Ruby Htslib ⭐ 7
HTSlib bindings for Ruby
total releases 19latest release May 17, 2023most recent commit 3 months ago
Hts ⭐ 115
biogo high throughput sequencing repository
dependent packages 71total releases 16latest release August 21, 2022most recent commit 8 months ago
Samql ⭐ 20
SQL-like query language for the SAM/BAM file format
latest release May 30, 2021most recent commit 7 months ago
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