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The Top 23 Reproducible Research Open Source Projects

Open source projects categorized as Reproducible Research
Categories > Science > Reproducible Research
Targets Shiny ⭐ 60
Example Shiny app containing a targets pipeline.
most recent commit 7 months ago
Panoptes ⭐ 59
Monitor computational workflows in real time
total releases 5most recent commit 4 months ago
Lumberjack ⭐ 59
Track changes in data with ease
dependent packages 2total releases 11most recent commit 8 months ago
Itkpythonpackage ⭐ 59
A setup script to generate ITK Python Wheels
most recent commit 6 months ago
Drake Examples ⭐ 58
Example workflows for the drake R package
most recent commit 2 years ago
Oaprogression ⭐ 58
Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical Data
most recent commit 2 years ago
Drake ⭐ 57
The user manual for the drake R package
most recent commit 3 years ago
Nozzle ⭐ 55
Nozzle is a report generation toolkit for data analysis pipelines implemented in R.
dependent packages 2total releases 4most recent commit 8 years ago
Chembl Downloader ⭐ 55
Write reproducible code for getting and processing ChEMBL
most recent commit 3 months ago
Dun ⭐ 52
Code for "Depth Uncertainty in Neural Networks" (https://arxiv.org/abs/2006.08437)
most recent commit 3 years ago
Benchpress ⭐ 52
A Snakemake workflow to run and benchmark structure learning (a.k.a. causal discovery) algorithms for probabilistic graphical models.
most recent commit 3 months ago
Pcaexplorer ⭐ 51
pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
most recent commit 6 months ago
Mpgap ⭐ 51
Multi-platform genome assembly pipeline for Illumina, Nanopore and PacBio reads
most recent commit a month ago
Itksphinxexamples ⭐ 50
Cookbook examples for the Insight Toolkit documented with Sphinx
most recent commit 6 months ago
Biosimspace ⭐ 48
An interoperable Python framework for biomolecular simulation.
most recent commit 3 months ago
Moai ⭐ 47
moai is a PyTorch-based AI Model Development Kit (MDK) created to improve data-driven model workflows, design and reproducibility.
dependent packages 2total releases 40most recent commit 3 months agopypi moai-mdk} Downloads
Variational Sparse Coding ⭐ 47
Reproducing the paper "Variational Sparse Coding" for the ICLR 2019 Reproducibility Challenge
most recent commit a year ago
Ck Artifact Evaluation ⭐ 46
Collective Knowledge repository to support artifact evaluation and reproducibility initiatives:
most recent commit 3 months ago
Reprohack Hq ⭐ 46
ReproHack Headquarters
most recent commit 2 years ago
Open Solution Googleai Object Detection ⭐ 46
Open solution to the Google AI Object Detection Challenge 🍁
most recent commit 2 years ago
Ten Simple Rules Dockerfiles ⭐ 45
Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science
most recent commit 3 years ago
Targets Minimal ⭐ 45
A minimal example data analysis project with the targets R package
most recent commit 2 years ago
Research Software Directory ⭐ 44
The Research Software Directory is a content management system that is tailored to software.
most recent commit a year ago
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