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The Top 17 R Tsne Open Source Projects

Open source projects categorized as R Tsne
Tidybulk ⭐ 153
Brings bulk and pseudobulk transcriptomics to the tidyverse
most recent commit 4 months ago
Tidyseurat ⭐ 131
Seurat meets tidyverse. The best of both worlds.
total releases 14most recent commit 3 months ago
Interactive 3d Plotting In Seurat 3.0.0 ⭐ 88
This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
most recent commit a year ago
Smallvis ⭐ 63
R package for dimensionality reduction of small datasets
most recent commit a year ago
Reductionwrappers ⭐ 32
R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)
most recent commit a year ago
Nanny ⭐ 27
A tidyverse suite for (pre-) machine-learning: cluster, PCA, permute, impute, rotate, redundancy, triangular, smart-subset, abundant and variable features.
most recent commit 9 months ago
Giniclust ⭐ 23
GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index
total releases 12most recent commit 6 years ago
Projector ⭐ 16
Project Dense Vectors Text Representation on 2D Plan
total releases 2most recent commit 5 years ago
Psychwordvec ⭐ 15
🔜 Integrative Toolbox of Word Embedding Research for Psychological Science.
most recent commit 7 months ago
Sneer ⭐ 13
Stochastic Neighbor Embedding Experiments in R
most recent commit a year ago
Snedata ⭐ 11
SNE Simulation Dataset Functions
most recent commit 5 months ago
Csomapr ⭐ 8
R package of CSOmap(developing
most recent commit 2 years ago
Tsneplots ⭐ 6
An R script for automatically creating coloured tSNE plots
most recent commit 3 years ago
Rnetsne ⭐ 6
most recent commit 6 years ago
Scrna_shiny ⭐ 6
scRNA-seq Shiny App
most recent commit a year ago
Startml ⭐ 6
R package for automatic hyper parameter tuning and ensembles with deep learning, gradient boosting machines, and random forests. Powered by h2o.
most recent commit 6 years ago
Depmap Analysis ⭐ 5
This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between genes and helps predict the efficacy and selectivity of candidate cancer drugs"
most recent commit 3 years ago
The 3 Latest Releases In R Tsne Open Source Projects
Tidyseurat ⭐ 131
Seurat meets tidyverse. The best of both worlds.
total releases 14latest release November 28, 2023most recent commit 3 months ago
Projector ⭐ 16
Project Dense Vectors Text Representation on 2D Plan
total releases 2latest release February 27, 2018most recent commit 5 years ago
Giniclust ⭐ 23
GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index
total releases 12latest release July 12, 2016most recent commit 6 years ago
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