Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 23 Structure Pdb Open Source Projects

Open source projects categorized as Structure Pdb
Molstar ⭐ 543
A comprehensive macromolecular library
dependent packages 24total releases 268most recent commit 3 months agonpm molstar} Downloads
Pdbex ⭐ 531
pdbex is a utility for reconstructing structures and unions from the PDB into compilable C headers
most recent commit 3 years ago
Rmsd ⭐ 438
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
dependent packages 12total releases 9most recent commit 4 months agopypi rmsd} Downloads
Prospr ⭐ 407
ProSPr: Protein Structure Prediction
most recent commit 2 years ago
Icn3d ⭐ 135
web-based protein structure viewer and analysis tool interactively or in batch mode
dependent packages 2total releases 140most recent commit 3 months agonpm icn3d} Downloads
Rna Tools ⭐ 129
🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online
total releases 110most recent commit 3 months ago
Dssp ⭐ 113
Application to assign secondary structure to proteins
most recent commit 5 months ago
Proteinsecondarystructure Cnn ⭐ 93
Protein Secondary Structure predictor using Convolutional Neural Networks
most recent commit 9 months ago
Biostructures.jl ⭐ 77
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
most recent commit 4 months ago
Pdbtools ⭐ 68
A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
most recent commit 5 years ago
Coronavirus_structural_task_force ⭐ 60
Repository for the molecular structures related with Corona virusses and their re-processing
most recent commit a year ago
Vscoding Sequence ⭐ 56
VSCode Extension for interactively visualising protein structure data in the editor
most recent commit a year ago
Cath Tools ⭐ 51
Protein structure comparison tools such as SSAP and SNAP
most recent commit 5 months ago
Pmx ⭐ 33
Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
most recent commit 5 years ago
Molmil ⭐ 33
WebGL based molecular viewer
most recent commit 4 months ago
Ramanet ⭐ 31
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
most recent commit 2 years ago
Barnaba ⭐ 26
Analyse Nucleic Acids Structure and Simulations with baRNAba
total releases 6most recent commit a year ago
Deltavinaxgb ⭐ 24
This is a machine-learning based protein-ligand scoring function.
most recent commit 4 years ago
Proteinensembles.jl ⭐ 21
Generate and perturb protein structural ensembles using the ExProSE algorithm
most recent commit 6 months ago
Getpdb ⭐ 20
Download pdb/protein structures from Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicates(Optional, maybe lost some conformation changed structures) and save as "UniprotID-PDBID-ModelID-ChainID.pdb/cif".
most recent commit 5 months ago
Hpdb ⭐ 19
PDB parser in Haskell
total releases 22most recent commit 5 years ago
Pdb2sql ⭐ 16
Fast and versatile biomolecular structure PDB file parser using SQL queries
most recent commit a year ago
Rosettadesign ⭐ 15
RosettaDesign using PyRosetta
most recent commit 5 years ago
The 3 Most Depended On Structure Pdb Open Source Projects
Molstar ⭐ 543
A comprehensive macromolecular library
dependent packages 24total releases 268latest release December 04, 2023most recent commit 3 months agonpm molstar} Downloads
Rmsd ⭐ 438
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
dependent packages 12total releases 9latest release January 06, 2023most recent commit 4 months agopypi rmsd} Downloads
Icn3d ⭐ 135
web-based protein structure viewer and analysis tool interactively or in batch mode
dependent packages 2total releases 140latest release November 08, 2023most recent commit 3 months agonpm icn3d} Downloads
The 7 Latest Releases In Structure Pdb Open Source Projects
Molstar ⭐ 543
A comprehensive macromolecular library
dependent packages 24total releases 268latest release December 04, 2023most recent commit 3 months agonpm molstar} Downloads
Icn3d ⭐ 135
web-based protein structure viewer and analysis tool interactively or in batch mode
dependent packages 2total releases 140latest release November 08, 2023most recent commit 3 months agonpm icn3d} Downloads
Rmsd ⭐ 438
Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format
dependent packages 12total releases 9latest release January 06, 2023most recent commit 4 months agopypi rmsd} Downloads
Barnaba ⭐ 26
Analyse Nucleic Acids Structure and Simulations with baRNAba
total releases 6latest release December 15, 2022most recent commit a year ago
Hpdb ⭐ 19
PDB parser in Haskell
total releases 22latest release July 16, 2018most recent commit 5 years ago
Pdb Magician ⭐ 15
Parse PDB Files and generates C# class library which helps with interpreting memory images.
total releases 4latest release December 21, 2017most recent commit 2 years ago
Popular Software Development Categories
Continuous Integration
Functional Programming
Developer Tools
Generation
Jenkins
Continuous Deployment
Travis
Reverse Engineering
Changelog
Ci Cd
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.