Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 23 Python Mri Open Source Projects

Open source projects categorized as Python Mri
Fastmri ⭐ 1,197
A large-scale dataset of both raw MRI measurements and clinical MRI images.
total releases 5most recent commit 3 months ago
Sigpy ⭐ 276
Python package for signal processing, with emphasis on iterative methods
dependent packages 6total releases 35most recent commit 4 months agopypi sigpy} Downloads
Intensity Normalization ⭐ 272
normalize the intensities of various MR image modalities
dependent packages 1total releases 16most recent commit a year agopypi intensity-normalization} Downloads
Spinalcordtoolbox ⭐ 184
Comprehensive and open-source library of analysis tools for MRI of the spinal cord.
most recent commit 10 days ago
Cnn 3d Images Tensorflow ⭐ 176
3D image classification using CNN (Convolutional Neural Network)
most recent commit 4 years ago
Deepinv ⭐ 165
PyTorch library for solving imaging inverse problems using deep learning
most recent commit 3 months ago
Deep Mri Reconstruction ⭐ 159
Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: Implementation & Demo
most recent commit 5 years ago
Torchkbnufft ⭐ 133
A high-level, easy-to-deploy non-uniform Fast Fourier Transform in PyTorch.
dependent packages 1total releases 18most recent commit a year agopypi torchkbnufft} Downloads
Livianet ⭐ 133
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
most recent commit 4 years ago
Unsupervised_anomaly_detection_brain_mri ⭐ 123
Autoencoders for Unsupervised Anomaly Segmentation in Brain MR Images: A Comparative Study
most recent commit 2 years ago
Smriprep ⭐ 111
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
dependent packages 4total releases 64most recent commit 4 months agopypi smriprep} Downloads
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32most recent commit 3 months ago
Enigma ⭐ 101
The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠
most recent commit 5 months ago
Pypulseq ⭐ 98
Pulseq in Python
dependent packages 4total releases 12most recent commit 3 months agopypi pypulseq} Downloads
Pcrlv2 ⭐ 83
An official implementation of PCRLv2 (pre-training and fine-tuning code are included).
most recent commit a year ago
3d Gan Superresolution ⭐ 79
3D super-resolution using Generative Adversarial Networks
most recent commit 6 years ago
Mrqy ⭐ 73
MRQy is a quality assurance and checking tool for quantitative assessment of magnetic resonance imaging (MRI) data.
most recent commit 7 months ago
Resvit ⭐ 70
Official Implementation of ResViT: Residual Vision Transformers for Multi-modal Medical Image Synthesis
most recent commit a year ago
Segmentator ⭐ 68
3D MRI data exploration and segmentation tool.
most recent commit 10 months ago
Meddlr ⭐ 59
A flexible ML framework built to simplify medical image reconstruction and analysis experimentation.
dependent packages 1total releases 18most recent commit 7 months agopypi meddlr} Downloads
Bidskit ⭐ 57
Utility functions for working with DICOM and BIDS neuroimaging data
total releases 27most recent commit 3 months ago
Skm Tea ⭐ 54
Repository for the Stanford Knee MRI Multi-Task Evaluation (SKM-TEA) Dataset
total releases 4most recent commit a year ago
Segnetcmr ⭐ 54
A Tensorflow implementation of SegNet for cardiac MRI segmentation
most recent commit 6 years ago
The 10 Most Depended On Python Mri Open Source Projects
Phantominator ⭐ 6
Generate numerical phantoms.
dependent packages 7total releases 28latest release April 26, 2020most recent commit 3 years agopypi phantominator} Downloads
Sigpy ⭐ 276
Python package for signal processing, with emphasis on iterative methods
dependent packages 6total releases 35latest release October 16, 2023most recent commit 4 months agopypi sigpy} Downloads
Pypulseq ⭐ 98
Pulseq in Python
dependent packages 4total releases 12latest release May 03, 2021most recent commit 3 months agopypi pypulseq} Downloads
Smriprep ⭐ 111
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
dependent packages 4total releases 64latest release December 08, 2023most recent commit 4 months agopypi smriprep} Downloads
Dosma ⭐ 46
An AI-powered open-source medical image analysis toolbox
dependent packages 3total releases 9latest release April 18, 2022most recent commit a year agopypi dosma} Downloads
Ssfp ⭐ 6
SSFP simulation and algorithms.
dependent packages 2total releases 11latest release October 25, 2023most recent commit 5 months agopypi ssfp} Downloads
Django_mri ⭐ 6
A reusable Django app to manage MRI data.
dependent packages 1total releases 4latest release December 03, 2019most recent commit a year agopypi django-mri} Downloads
Meddlr ⭐ 59
A flexible ML framework built to simplify medical image reconstruction and analysis experimentation.
dependent packages 1total releases 18latest release August 03, 2023most recent commit 7 months agopypi meddlr} Downloads
Tfkbnufft ⭐ 25
A robust, easy-to-deploy non-uniform Fast Fourier Transform in TensorFlow.
dependent packages 1total releases 15latest release July 23, 2021most recent commit a year agopypi tfkbnufft} Downloads
Intensity Normalization ⭐ 272
normalize the intensities of various MR image modalities
dependent packages 1total releases 16latest release March 15, 2022most recent commit a year agopypi intensity-normalization} Downloads
The 10 Latest Releases In Python Mri Open Source Projects
Smriprep ⭐ 111
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
dependent packages 4total releases 64latest release December 08, 2023most recent commit 4 months agopypi smriprep} Downloads
Fmri Physio Log ⭐ 7
Parse Siemens PMU files
total releases 9latest release November 18, 2023most recent commit 3 months ago
Brats Toolkit ⭐ 53
Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
total releases 12latest release November 09, 2023most recent commit 4 months ago
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32latest release October 30, 2023most recent commit 3 months ago
Ssfp ⭐ 6
SSFP simulation and algorithms.
dependent packages 2total releases 11latest release October 25, 2023most recent commit 5 months agopypi ssfp} Downloads
Sigpy ⭐ 276
Python package for signal processing, with emphasis on iterative methods
dependent packages 6total releases 35latest release October 16, 2023most recent commit 4 months agopypi sigpy} Downloads
Bidskit ⭐ 57
Utility functions for working with DICOM and BIDS neuroimaging data
total releases 27latest release September 07, 2023most recent commit 3 months ago
Pygrappa ⭐ 51
Python implementations of GRAPPA-like algorithms.
total releases 56latest release September 05, 2023most recent commit 7 months ago
Nigsp ⭐ 15
NiGSP: a module for graph signal processing on neuroimaging data
total releases 28latest release August 16, 2023most recent commit 4 months ago
Erwin ⭐ 10
Quantitative MRI toolbox in Python
total releases 7latest release August 09, 2023most recent commit 8 months ago
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.