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The Top 23 Python Medical Image Segmentation Open Source Projects

Open source projects categorized as Python Medical Image Segmentation
Categories > Medical Image Segmentation
Paddleseg ⭐ 6,691
Easy-to-use image segmentation library with awesome pre-trained model zoo, supporting wide-range of practical tasks in Semantic Segmentation, Interactive Segmentation, Panoptic Segmentation, Image Matting, 3D Segmentation, etc.
dependent packages 2total releases 8most recent commit 17 hours agopypi paddleseg} Downloads
Mmsegmentation ⭐ 5,505
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
dependent packages 2total releases 30most recent commit 16 hours agopypi mmsegmentation} Downloads
Medicalzoopytorch ⭐ 896
A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation
most recent commit a year ago
Bcdu Net ⭐ 435
BCDU-Net : Medical Image Segmentation
most recent commit a year ago
Caranet ⭐ 407
Context Axial Reverse Attention Network for Small Medical Objects Segmentation
most recent commit a month ago
Miscnn ⭐ 338
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
total releases 60most recent commit 4 months ago
Pranet ⭐ 309
PraNet: Parallel Reverse Attention Network for Polyp Segmentation, MICCAI 2020 (Oral). Code using Jittor Framework is available.
most recent commit 4 days ago
Dc Unet ⭐ 298
We proposed a novel U-Net-based model -- DC-UNet to do medical image segmentation.
most recent commit 17 days ago
Cfpnet Medicine ⭐ 271
CFPNet-M: A Light-Weight Encoder-Decoder Based Network for Multimodal Biomedical Image Real-Time Segmentation
most recent commit 17 days ago
Kiu Net Pytorch ⭐ 245
Official Pytorch Code of KiU-Net for Image/3D Segmentation - MICCAI 2020 (Oral), IEEE TMI
most recent commit 10 months ago
Min_max_similarity ⭐ 213
A contrastive learning based semi-supervised segmentation network for medical image segmentation
most recent commit 6 months ago
Transbts ⭐ 208
This repo provides the official code for : 1) TransBTS: Multimodal Brain Tumor Segmentation Using Transformer (https://arxiv.org/abs/2103.04430) , accepted by MICCAI2021. 2) TransBTSV2: Towards Better and More Efficient Volumetric Segmentation of Medical Images(https://arxiv.org/abs/2201.12785).
most recent commit 9 months ago
Livianet ⭐ 133
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
most recent commit 3 years ago
Unext Pytorch ⭐ 124
Official Pytorch Code base for "UNeXt: MLP-based Rapid Medical Image Segmentation Network", MICCAI 2022
most recent commit 10 months ago
Cbim Medical Image Segmentation ⭐ 119
A PyTorch framework for medical image segmentation
most recent commit 4 days ago
Hyperdensenet ⭐ 106
This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
most recent commit 3 years ago
Resunetplusplus ⭐ 99
Official code for ResUNetplusplus for medical image segmentation (TensorFlow & Pytorch implementation) (IEEE ISM)
most recent commit 5 months ago
Wsl4mis ⭐ 98
Scribbles or Points-based weakly-supervised learning for medical image segmentation, a strong baseline, and tutorial for research and application.
most recent commit 3 months ago
Organsegrstn_pytorch ⭐ 88
PyTorch implementation of OrganSegRSTN - CVPR 2018
most recent commit a year ago
Vps ⭐ 87
Video Polyp Segmentation: A Deep Learning Perspective (MIR 2022)
most recent commit 10 days ago
Uacanet ⭐ 83
Official PyTorch implementation of UACANet: Uncertainty Augmented Context Attention for Polyp Segmentation (ACMMM 2021)
most recent commit 5 months ago
Data Science Bowl 2018 ⭐ 74
DATA-SCIENCE-BOWL-2018 Find the nuclei in divergent images to advance medical discovery
most recent commit 5 years ago
Unetr ⭐ 74
Unofficial code base for UNETR: Transformers for 3D Medical Image Segmentation
most recent commit a month ago
The 2 Most Depended On Python Medical Image Segmentation Open Source Projects
The 4 Latest Releases In Python Medical Image Segmentation Open Source Projects
Mmsegmentation ⭐ 5,505
OpenMMLab Semantic Segmentation Toolbox and Benchmark.
dependent packages 2total releases 30latest release July 01, 2022most recent commit 16 hours agopypi mmsegmentation} Downloads
Miseval ⭐ 35
a metric library for Medical Image Segmentation EVALuation
total releases 7latest release March 22, 2022most recent commit 8 months ago
Miscnn ⭐ 338
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
total releases 60latest release February 11, 2022most recent commit 4 months ago
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