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The Top 23 Python Jupyter Notebook Neuroscience Open Source Projects

Open source projects categorized as Python Jupyter Notebook Neuroscience
Categories > Data Processing > Jupyter Notebook
Categories > Science > Neuroscience
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5most recent commit 3 months agopypi lava-nc} Downloads
Org.geppetto ⭐ 184
Geppetto is an open-source platform to build web-based applications to visualize and simulate neuroscience data and models.
most recent commit 4 years ago
Analyzing_neural_time_series ⭐ 124
python implementations of Analyzing Neural Time Series Textbook
most recent commit 2 years ago
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9most recent commit 3 months agopypi bg-atlasapi} Downloads
Tvb Root ⭐ 91
Main TVB codebase
total releases 5most recent commit 3 months ago
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65most recent commit 8 months agopypi pyabf} Downloads
Labhacks ⭐ 68
Resources for data driven neuroscientists.
most recent commit 2 years ago
Pymindaffectbci ⭐ 55
Python SDK for high performance on-line Brain Computer Interface development.
total releases 25most recent commit 9 months ago
Spyglass ⭐ 50
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
total releases 11most recent commit 3 months ago
Itktubetk ⭐ 39
TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.
total releases 15most recent commit 3 months ago
Python In Neuroscience Tutorials ⭐ 38
Collection of tutorials about methods of computational neuroscience using Python
most recent commit 7 years ago
Basic Introduction To Python ⭐ 34
Introduction to Mathematics and Python using Neuroscience Examples
most recent commit 3 months ago
Neuronunit ⭐ 32
A package for data-driven validation of neuron and ion channel models using SciUnit
dependent packages 1total releases 7most recent commit 3 years agopypi neuronunit} Downloads
Appliedstatisticsforneuroscience ⭐ 26
Materials for UC Berkeley Neuroscience 299
most recent commit 4 years ago
Cncc 2019 ⭐ 24
Computational Neuroscience Crash Course (CNCC 2019)
most recent commit 3 years ago
Cncc 2020 ⭐ 20
Computational Neuroscience Crash Course (University of Bordeaux, 2020)
most recent commit 3 years ago
Visual_behavior_analysis ⭐ 20
Python package for analyzing behavioral data for Brain Observatory: Visual Behavior
most recent commit 3 months ago
Dtw ⭐ 20
Dynamic Time Warping in Python / C (using ctypes)
most recent commit 3 years ago
Nwb_hackathons ⭐ 19
Repository for collecting materials from nwb hackathons
most recent commit 3 months ago
Pylossless ⭐ 11
🧠 EEG Processing pipeline that annotates continuous data
total releases 1most recent commit 3 months ago
Ucsf Data_driven_neuro ⭐ 10
A repository to store course materials for the data-driven neuroscience in python short-course.
most recent commit 7 years ago
Osbv2 ⭐ 10
An updated version of the Open Source Brain platform
most recent commit 3 months ago
Nat ⭐ 6
Python module to use the annotations created with NeuroCurator, for example in a Jupyter notebook.
most recent commit 5 years ago
The 4 Most Depended On Python Jupyter Notebook Neuroscience Open Source Projects
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9latest release March 31, 2022most recent commit 3 months agopypi bg-atlasapi} Downloads
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5latest release November 15, 2023most recent commit 3 months agopypi lava-nc} Downloads
Neuronunit ⭐ 32
A package for data-driven validation of neuron and ion channel models using SciUnit
dependent packages 1total releases 7latest release July 04, 2016most recent commit 3 years agopypi neuronunit} Downloads
The 10 Latest Releases In Python Jupyter Notebook Neuroscience Open Source Projects
Lava ⭐ 471
A Software Framework for Neuromorphic Computing
dependent packages 4total releases 5latest release November 15, 2023most recent commit 3 months agopypi lava-nc} Downloads
Spyglass ⭐ 50
Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
total releases 11latest release October 23, 2023most recent commit 3 months ago
Pyabf ⭐ 86
pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files
dependent packages 7total releases 65latest release August 02, 2023most recent commit 8 months agopypi pyabf} Downloads
Pylossless ⭐ 11
🧠 EEG Processing pipeline that annotates continuous data
total releases 1latest release April 29, 2023most recent commit 3 months ago
Bg Atlasapi ⭐ 97
A lightweight python module to interact with atlases for systems neuroscience
dependent packages 7total releases 9latest release March 31, 2022most recent commit 3 months agopypi bg-atlasapi} Downloads
Pymindaffectbci ⭐ 55
Python SDK for high performance on-line Brain Computer Interface development.
total releases 25latest release March 18, 2022most recent commit 9 months ago
Tvb Root ⭐ 91
Main TVB codebase
total releases 5latest release October 11, 2021most recent commit 3 months ago
Neuronunit ⭐ 32
A package for data-driven validation of neuron and ion channel models using SciUnit
dependent packages 1total releases 7latest release July 04, 2016most recent commit 3 years agopypi neuronunit} Downloads
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