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The Top 12 Vcf Gwas Open Source Projects

Open source projects categorized as Vcf Gwas
Categories > Gwas
Categories > Science > Vcf
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146most recent commit 3 months agopypi hail} Downloads
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38most recent commit a year ago
Ldblockshow ⭐ 102
LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
most recent commit 7 months ago
Tiledb Vcf ⭐ 79
Efficient variant-call data storage and retrieval library using the TileDB storage library.
most recent commit 3 months ago
Scoary ⭐ 71
Pan-genome wide association studies
total releases 16most recent commit 7 years ago
Vcf2gwas ⭐ 62
Python API for comprehensive GWAS analysis using GEMMA
most recent commit 8 months ago
Gor ⭐ 37
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
most recent commit 4 months ago
Gwas2vcf ⭐ 37
Convert GWAS summary statistics to VCF
most recent commit a year ago
Gwas Vcf Specification ⭐ 9
Specification for the GWAS-VCF format (manuscript in preparation)
most recent commit 3 years ago
Ipat ⭐ 7
iPat allows you to perform GWAS and GS with drags and clicks!
most recent commit 4 years ago
Ttplot ⭐ 6
Tao Yan's Plot Toolkit
most recent commit 5 years ago
Pygwasvcf ⭐ 5
Python library for reading GWAS summary statistics in GWAS-VCF files
total releases 1most recent commit 2 years ago
The 4 Latest Releases In Vcf Gwas Open Source Projects
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146latest release October 30, 2023most recent commit 3 months agopypi hail} Downloads
Variantspark ⭐ 121
machine learning for genomic variants
total releases 38latest release May 20, 2022most recent commit a year ago
Pygwasvcf ⭐ 5
Python library for reading GWAS summary statistics in GWAS-VCF files
total releases 1latest release March 18, 2022most recent commit 2 years ago
Scoary ⭐ 71
Pan-genome wide association studies
total releases 16latest release October 04, 2017most recent commit 7 years ago
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