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The Top 23 Global Health Open Source Projects

Open source projects categorized as Global Health
Categories > Global Health
Openemr ⭐ 2,502
The most popular open source electronic health records and medical practice management solution.
most recent commit 3 months ago
Collect ⭐ 697
ODK Collect is an Android app for filling out forms. It's been used to collect billions of data points in challenging environments around the world. Contribute and make the world a better place! ✨📋✨
most recent commit 10 days ago
Hospitalrun ⭐ 500
Monorepo that holds all of HospitalRun's v2 projects.
most recent commit 3 years ago
Roary ⭐ 219
Rapid large-scale prokaryote pan genome analysis
total releases 83most recent commit 2 years ago
Circlator ⭐ 193
A tool to circularize genome assemblies
total releases 33most recent commit 8 months ago
Artemis ⭐ 191
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
most recent commit a year ago
Snp Sites ⭐ 173
Finds SNP sites from a multi-FASTA alignment file
most recent commit 3 years ago
Covid 19_unified Dataset ⭐ 168
Unified COVID-19 Dataset
most recent commit 10 months ago
Ariba ⭐ 135
Antimicrobial Resistance Identification By Assembly
dependent packages 1total releases 54most recent commit a year agopypi ariba} Downloads
Gubbins ⭐ 133
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
most recent commit 5 months ago
Build ⭐ 108
ODK Build is a drag-and-drop form designer for ODK XForms. Thousands of users around the world depend on it for their data collection campaigns. Contribute and make the world a better place! ✨📝✨
most recent commit 6 months ago
Assembly Stats ⭐ 92
Get assembly statistics from FASTA and FASTQ files
most recent commit a year ago
Czid Web ⭐ 75
Infectious Disease Sequencing Platform
most recent commit 3 months ago
Openlmis Ref Distro ⭐ 62
OpenLMIS v3+ Reference Distribution. Last mile health commodity information system.
most recent commit a month ago
Briefcase ⭐ 62
ODK Briefcase is a Java application for fetching and pushing forms and their contents. It helps make billions of data points from ODK portable. Contribute and make the world a better place! ✨💼✨
most recent commit 2 years ago
Javarosa ⭐ 51
The core library that many of the ODK tools are built around. It's written in Java, implements the ODK XForms spec, and runs on mobile devices and cloud servers. ✨🏗✨
dependent packages 1total releases 27most recent commit 4 months ago
Fastaq ⭐ 45
Python3 scripts to manipulate FASTA and FASTQ files
dependent packages 7total releases 21most recent commit 2 years agopypi pyfastaq} Downloads
Assembly_improvement ⭐ 39
Improve the quality of a denovo assembly by scaffolding and gap filling
most recent commit 4 years ago
Pathogen Informatics Training ⭐ 38
most recent commit 3 years ago
Iva ⭐ 37
de novo virus assembler of Illumina paired reads
total releases 16most recent commit 3 years ago
Commcare Android ⭐ 35
Offline First Android software client for CommCare, the world's largest platform for designing, managing, and deploying robust mobile applications to frontline workers worldwide
most recent commit 4 months ago
Xforms Spec ⭐ 29
The XForms-derived specification used in the ODK ecosystem. If you are interested in building a tool that is compliant with the forms rendered by ODK tools, this is the place to start. ✨⚒✨
most recent commit 3 months ago
Central Frontend ⭐ 29
Vue.js based frontend for ODK Central
most recent commit 3 months ago
The 3 Most Depended On Global Health Open Source Projects
Fastaq ⭐ 45
Python3 scripts to manipulate FASTA and FASTQ files
dependent packages 7total releases 21latest release February 19, 2018most recent commit 2 years agopypi pyfastaq} Downloads
Ariba ⭐ 135
Antimicrobial Resistance Identification By Assembly
dependent packages 1total releases 54latest release September 07, 2020most recent commit a year agopypi ariba} Downloads
The 10 Latest Releases In Global Health Open Source Projects
Ariba ⭐ 135
Antimicrobial Resistance Identification By Assembly
dependent packages 1total releases 54latest release September 07, 2020most recent commit a year agopypi ariba} Downloads
Tiptoft ⭐ 20
Predict plasmids from uncorrected long read data
total releases 6latest release December 05, 2019most recent commit 4 years ago
Bio Tradis ⭐ 15
A set of tools to analyse the output from TraDIS analyses
total releases 14latest release December 04, 2019most recent commit 8 months ago
Albatradis ⭐ 7
Comparative TraDIS analysis
total releases 2latest release December 03, 2019most recent commit a year ago
Roary ⭐ 219
Rapid large-scale prokaryote pan genome analysis
total releases 83latest release November 06, 2019most recent commit 2 years ago
Fastaq ⭐ 45
Python3 scripts to manipulate FASTA and FASTQ files
dependent packages 7total releases 21latest release February 19, 2018most recent commit 2 years agopypi pyfastaq} Downloads
Circlator ⭐ 193
A tool to circularize genome assemblies
total releases 33latest release January 31, 2018most recent commit 8 months ago
Iva ⭐ 37
de novo virus assembler of Illumina paired reads
total releases 16latest release January 25, 2018most recent commit 3 years ago
Seroba ⭐ 14
k-mer based Pipeline to identify the Serotype from Illumina NGS reads
total releases 3latest release November 21, 2017most recent commit 9 months ago
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