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The Top 17 Genomics Gwas Open Source Projects

Open source projects categorized as Genomics Gwas
Categories > Science > Genomics
Categories > Gwas
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146most recent commit 3 months agopypi hail} Downloads
Glow ⭐ 251
An open-source toolkit for large-scale genomic analysis
dependent packages 1total releases 8most recent commit 3 months ago
Gwa_tutorial ⭐ 184
A comprehensive tutorial about GWAS and PRS
most recent commit 4 years ago
Qqman ⭐ 141
An R package for creating Q-Q and manhattan plots from GWAS results
dependent packages 12total releases 6most recent commit 8 months ago
Tiledb Vcf ⭐ 79
Efficient variant-call data storage and retrieval library using the TileDB storage library.
most recent commit 3 months ago
Scoary ⭐ 71
Pan-genome wide association studies
total releases 16most recent commit 7 years ago
Geneticsmakie.jl ⭐ 66
🧬High-performance genetics- and genomics-related data visualization using Makie.jl
most recent commit 3 months ago
Mungesumstats ⭐ 59
Rapid standardisation and quality control of GWAS or QTL summary statistics
most recent commit 3 months ago
Magma_celltyping ⭐ 50
Find causal cell-types underlying complex trait genetics
most recent commit 8 months ago
Gor ⭐ 37
GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.
most recent commit 4 months ago
Bgdata ⭐ 30
A Suite of Packages for Analysis of Big Genomic Data
dependent packages 2total releases 7most recent commit 7 months ago
Kgwasflow ⭐ 19
kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
most recent commit 6 months ago
Faster_lmm_d ⭐ 12
A faster lmm for GWAS. Supports GPU backend.
most recent commit 5 years ago
Glow Solution Accelerator ⭐ 10
Genome-wide association studies identify genetic variations associated with a target disease or trait. Researchers and clinicians can use this information to better detect, treat and prevent chronic health conditions. This Solution Accelerator notebook builds on top of Glow
most recent commit 6 months ago
Hogwash ⭐ 10
Three bacterial GWAS methods all rolled into one easy-to-use R package
most recent commit 2 years ago
Biomm ⭐ 9
BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data
most recent commit a year ago
Ipat ⭐ 7
iPat allows you to perform GWAS and GS with drags and clicks!
most recent commit 4 years ago
The 4 Most Depended On Genomics Gwas Open Source Projects
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146latest release October 30, 2023most recent commit 3 months agopypi hail} Downloads
Qqman ⭐ 141
An R package for creating Q-Q and manhattan plots from GWAS results
dependent packages 12total releases 6latest release August 23, 2023most recent commit 8 months ago
Bgdata ⭐ 30
A Suite of Packages for Analysis of Big Genomic Data
dependent packages 2total releases 7latest release March 22, 2023most recent commit 7 months ago
Glow ⭐ 251
An open-source toolkit for large-scale genomic analysis
dependent packages 1total releases 8latest release June 23, 2020most recent commit 3 months ago
The 5 Latest Releases In Genomics Gwas Open Source Projects
Hail ⭐ 905
Cloud-native genomic dataframes and batch computing
dependent packages 17total releases 146latest release October 30, 2023most recent commit 3 months agopypi hail} Downloads
Qqman ⭐ 141
An R package for creating Q-Q and manhattan plots from GWAS results
dependent packages 12total releases 6latest release August 23, 2023most recent commit 8 months ago
Bgdata ⭐ 30
A Suite of Packages for Analysis of Big Genomic Data
dependent packages 2total releases 7latest release March 22, 2023most recent commit 7 months ago
Glow ⭐ 251
An open-source toolkit for large-scale genomic analysis
dependent packages 1total releases 8latest release June 23, 2020most recent commit 3 months ago
Scoary ⭐ 71
Pan-genome wide association studies
total releases 16latest release October 04, 2017most recent commit 7 years ago
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