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The Top 11 Jupyter Notebook Gene Expression Open Source Projects

Open source projects categorized as Jupyter Notebook Gene Expression
Categories > Gene Expression
Categories > Data Processing > Jupyter Notebook
Tangram ⭐ 153
Spatial alignment of single cell transcriptomic data.
total releases 11most recent commit a year ago
Pancancer ⭐ 61
Building classifiers using cancer transcriptomes across 33 different cancer-types
most recent commit 5 years ago
Biobombe ⭐ 44
BioBombe: Sequentially compressed gene expression features enhances biological signatures
most recent commit 3 years ago
Lincs ⭐ 20
Library of Integrated Cellular Signatures L1000
most recent commit 2 years ago
Cancer Data ⭐ 14
TCGA data acquisition and processing for Project Cognoma
most recent commit 6 years ago
Generic Expression Patterns ⭐ 11
Distinguishing between generic and experiment-specific gene expression signals.
most recent commit a year ago
Deep Learning Gene Expression ⭐ 10
Deep learning methods for feature selection in gene expression autism data.
most recent commit 5 years ago
Gear ⭐ 10
The gEAR Portal was created as a data archive and viewer for gene expression data including microarrays, bulk RNA-Seq, single-cell RNA-Seq and more.
most recent commit 4 months ago
Pancancer Evaluation ⭐ 9
Evaluating genome-wide prediction of driver mutations using pan-cancer data
most recent commit 8 months ago
Adversarial Gene Expression ⭐ 8
Adversarial generation of gene expression data using Generative Adversarial Networks
most recent commit 2 years ago
Pathcore T Analysis ⭐ 6
This repository is in support of the PathCORE-T paper (https://doi.org/10.1101/147645). It contains all the code and necessary data/metadata to repeat all analyses in the paper.
most recent commit 6 years ago
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