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The Top 14 Genomics Sequencing Dna Open Source Projects

Open source projects categorized as Genomics Sequencing Dna
Categories > Science > Dna
Categories > Science > Genomics
Categories > Science > Sequencing
Deepvariant ⭐ 2,978
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
most recent commit 4 months ago
Gatk ⭐ 1,576
Official code repository for GATK versions 4 and up
dependent packages 2total releases 46most recent commit a month ago
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30most recent commit 3 months agopypi galaxy-util} Downloads
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78most recent commit 4 months ago
Comp Genomics Class ⭐ 236
Code and examples for JHU Computational Genomics class
most recent commit 3 years ago
Genomics ⭐ 154
A collection of scripts and notes related to genomics and bioinformatics
most recent commit 2 years ago
Dnanalyzer ⭐ 122
Revolutionizing DNA analysis and making it accessible to all through innovative AI-powered analysis and interpretive tools
most recent commit 5 months ago
Fastq.bio ⭐ 93
An interactive web tool for quality control of DNA sequencing data
most recent commit a year ago
Catch ⭐ 63
A package for designing compact and comprehensive capture probe sets.
most recent commit 6 months ago
Deepsomatic ⭐ 45
DeepSomatic is an analysis pipeline that uses a deep neural network to call somatic variants from tumor-normal sequencing data.
most recent commit 6 months ago
Ctdnatools ⭐ 17
R package to work with ctDNA sequencing data
total releases 1most recent commit 2 years ago
Deepvariant On Spark ⭐ 11
DeepVariant-on-Spark is a germline short variant calling pipeline that runs Google DeepVariant on Apache Spark at scale.
most recent commit 2 years ago
Fastq.bio Serverless ⭐ 7
An interactive web tool for quality control of DNA sequencing data, using Cloudflare workers running WebAssembly
most recent commit 3 years ago
Adrsm ⭐ 5
Ancient DNA Read Simulator for Metagenomic
most recent commit 8 months ago
The 3 Most Depended On Genomics Sequencing Dna Open Source Projects
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78latest release October 13, 2023most recent commit 4 months ago
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30latest release December 08, 2023most recent commit 3 months agopypi galaxy-util} Downloads
Gatk ⭐ 1,576
Official code repository for GATK versions 4 and up
dependent packages 2total releases 46latest release March 16, 2023most recent commit a month ago
The 4 Latest Releases In Genomics Sequencing Dna Open Source Projects
Galaxy ⭐ 1,211
Data intensive science for everyone.
dependent packages 23total releases 30latest release December 08, 2023most recent commit 3 months agopypi galaxy-util} Downloads
Htsjdk ⭐ 271
A Java API for high-throughput sequencing data (HTS) formats.
dependent packages 87total releases 78latest release October 13, 2023most recent commit 4 months ago
Gatk ⭐ 1,576
Official code repository for GATK versions 4 and up
dependent packages 2total releases 46latest release March 16, 2023most recent commit a month ago
Ctdnatools ⭐ 17
R package to work with ctDNA sequencing data
total releases 1latest release March 04, 2020most recent commit 2 years ago
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