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The Top 19 R Differential Expression Open Source Projects

Open source projects categorized as R Differential Expression
Categories > Differential Expression
Tidybulk ⭐ 153
Brings bulk and pseudobulk transcriptomics to the tidyverse
most recent commit 4 months ago
Irap ⭐ 58
integrated RNA-seq Analysis Pipeline
most recent commit 5 years ago
Scclustviz ⭐ 42
Explore and share your scRNAseq clustering results
most recent commit 7 months ago
Scpower ⭐ 36
Experimental design framework for scRNAseq population studies (eQTL and DE)
most recent commit 4 months ago
Datest ⭐ 34
Compare different differential abundance and expression methods
most recent commit 2 years ago
Scpa ⭐ 33
R package for pathway analysis in scRNA-seq data
most recent commit 6 months ago
Ideal ⭐ 28
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
most recent commit 6 months ago
Tweedieverse ⭐ 24
Differential analysis of multi-omics data based on the Tweedie distribution
most recent commit 4 months ago
Degreport ⭐ 21
Create a cromphensive report of DEG list coming from any analysis of RNAseq data
most recent commit 3 months ago
Bioc_2020_tidytranscriptomics ⭐ 18
Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
most recent commit 4 years ago
Glimmav2 ⭐ 17
interactive plots for differential expression analysis
most recent commit a year ago
Microscope ⭐ 17
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
most recent commit 7 years ago
Vidger ⭐ 15
Make rapid visualizations of RNA-seq data in R
most recent commit 5 years ago
Sccode ⭐ 13
The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
most recent commit 5 months ago
Singlecellworkflow ⭐ 13
Tutorial for the analysis of scRNA-seq data in R
most recent commit 6 years ago
Promor ⭐ 9
A comprehensive R package for label-free proteomics data analysis and modeling
total releases 1most recent commit 9 months ago
Beadanalyze ⭐ 8
Automated differential expression analysis for Illumina beadarrays (HT12 V4 arrays).
most recent commit 8 years ago
Sclane ⭐ 6
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
most recent commit 4 months ago
Microarraypipeline ⭐ 5
MAAPster is a comprehensive tool to perform transcriptome analysis of human or mouse Affymetrix gene expression data
most recent commit 3 years ago
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