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The Top 23 Workflow Cwl Open Source Projects

Open source projects categorized as Workflow Cwl
Common Workflow Language ⭐ 1,425
Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
total releases 2most recent commit 5 months ago
Cromwell ⭐ 944
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
total releases 37most recent commit 3 months ago
Toil ⭐ 860
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
dependent packages 12total releases 528most recent commit 3 months agopypi toil} Downloads
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9most recent commit 3 months ago
Cwltool ⭐ 314
Common Workflow Language reference implementation
dependent packages 38total releases 430most recent commit 3 months agopypi cwltool} Downloads
Composer ⭐ 285
Visual and code editor for Common Workflow Language
dependent packages 2total releases 1most recent commit a year agonpm cottontail-frontend} Downloads
Cwl Airflow ⭐ 178
Python package to extend Airflow functionality with CWL1.1 support
total releases 38most recent commit 6 months ago
Cromwellonazure ⭐ 125
Microsoft Genomics supported implementation of the Broad Institute's Cromwell workflow engine on Azure
most recent commit 3 months ago
Reana ⭐ 114
REANA: Reusable research data analysis platform
most recent commit 3 months ago
Dockstore ⭐ 113
Our VM/Docker sharing infrastructure and management component
most recent commit 3 months ago
Rabix ⭐ 104
[Historical] Reproducible Analyses for Bioinformatics
most recent commit 5 years ago
Analysis Workflows ⭐ 99
Open workflow definitions for genomic analysis from MGI at WUSM.
most recent commit 10 months ago
Emg Viral Pipeline ⭐ 98
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
most recent commit 7 months ago
Planemo ⭐ 85
Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.
dependent packages 2total releases 134most recent commit 3 months agopypi planemo} Downloads
Workflow Execution Service Schemas ⭐ 81
The WES API is a standard way to run and manage portable workflows.
most recent commit 7 months ago
Cwl Svg ⭐ 72
A library for generating an interactive SVG visualization of CWL workflows
dependent packages 4total releases 74most recent commit a year agonpm cwl-svg} Downloads
Bunny ⭐ 70
[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
most recent commit 5 years ago
Bio Cwl Tools ⭐ 65
CWL CommandLineTool descriptions for biology/life-sciences related applications
most recent commit 8 months ago
Awe ⭐ 62
workflow and resource management system for bioinformatics data analysis
total releases 43most recent commit 4 years ago
Ochre ⭐ 57
Toolbox for OCR post-correction
most recent commit 5 years ago
Benten ⭐ 49
A language server for Common Workflow Language
total releases 15most recent commit 2 years ago
Cwl Ts ⭐ 48
Typescript data model for Common Workflow Language
dependent packages 6total releases 291most recent commit a year agonpm cwlts} Downloads
Systempiper ⭐ 45
Project Website:
most recent commit 6 months ago
The 10 Most Depended On Workflow Cwl Open Source Projects
Cwltool ⭐ 314
Common Workflow Language reference implementation
dependent packages 38total releases 430latest release December 07, 2023most recent commit 3 months agopypi cwltool} Downloads
Toil ⭐ 860
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
dependent packages 12total releases 528latest release July 27, 2023most recent commit 3 months agopypi toil} Downloads
Ro Crate Py ⭐ 37
Python library for RO-Crate
dependent packages 8total releases 15latest release October 13, 2023most recent commit 3 months agopypi rocrate} Downloads
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months agopypi janis-pipelines.core} Downloads
Cwl Ts ⭐ 48
Typescript data model for Common Workflow Language
dependent packages 6total releases 291latest release January 17, 2023most recent commit a year agonpm cwlts} Downloads
Cwl Format ⭐ 9
A very opinionated code formatter for CWL
dependent packages 6total releases 6latest release February 18, 2022most recent commit 4 months agopypi cwlformat} Downloads
Cwl Svg ⭐ 72
A library for generating an interactive SVG visualization of CWL workflows
dependent packages 4total releases 74latest release January 17, 2023most recent commit a year agonpm cwl-svg} Downloads
Cwltest ⭐ 16
Framework for testing CWL tools and workflows
dependent packages 3total releases 37latest release May 21, 2022most recent commit 3 months agopypi cwltest} Downloads
React Workflow Viz ⭐ 9
React component for visualizing CWL-like workflows (and similar data)
dependent packages 3total releases 11latest release September 19, 2023most recent commit 7 months agonpm @hms-dbmi-bgm/react-workflow-viz} Downloads
Cwl Upgrader ⭐ 5
Upgrade CWL syntax to a newer version
dependent packages 2total releases 24latest release November 13, 2023most recent commit 3 months agopypi cwl-upgrader} Downloads
The 10 Latest Releases In Workflow Cwl Open Source Projects
Cwltool ⭐ 314
Common Workflow Language reference implementation
dependent packages 38total releases 430latest release December 07, 2023most recent commit 3 months agopypi cwltool} Downloads
Cwl Upgrader ⭐ 5
Upgrade CWL syntax to a newer version
dependent packages 2total releases 24latest release November 13, 2023most recent commit 3 months agopypi cwl-upgrader} Downloads
Ro Crate Py ⭐ 37
Python library for RO-Crate
dependent packages 8total releases 15latest release October 13, 2023most recent commit 3 months agopypi rocrate} Downloads
Arvados ⭐ 354
An open source platform for managing and analyzing biomedical big data
total releases 9latest release September 21, 2023most recent commit 3 months ago
React Workflow Viz ⭐ 9
React component for visualizing CWL-like workflows (and similar data)
dependent packages 3total releases 11latest release September 19, 2023most recent commit 7 months agonpm @hms-dbmi-bgm/react-workflow-viz} Downloads
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months agopypi janis-pipelines.core} Downloads
Toil ⭐ 860
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
dependent packages 12total releases 528latest release July 27, 2023most recent commit 3 months agopypi toil} Downloads
Cwl Svg ⭐ 72
A library for generating an interactive SVG visualization of CWL workflows
dependent packages 4total releases 74latest release January 17, 2023most recent commit a year agonpm cwl-svg} Downloads
Cwl Ts ⭐ 48
Typescript data model for Common Workflow Language
dependent packages 6total releases 291latest release January 17, 2023most recent commit a year agonpm cwlts} Downloads
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