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The Top 23 Clinical Open Source Projects

Open source projects categorized as Clinical
Categories > Clinical
Pcgr ⭐ 234
Personal Cancer Genome Reporter (PCGR)
most recent commit 6 months ago
Ehrbase ⭐ 195
An open source openEHR server
dependent packages 3total releases 21most recent commit 3 months ago
Mne Cpp ⭐ 143
MNE-CPP: A Framework for Electrophysiology
most recent commit 3 months ago
Clinical Ner ⭐ 131
面向中文电子病历的命名实体识别
most recent commit 4 years ago
Charger ⭐ 70
Characterization of Germline variants
total releases 4most recent commit 3 years ago
Camel ⭐ 57
Clinically Adapted Model Enhanced from LLaMA
most recent commit 8 months ago
Mip ⭐ 36
Mutation Identification Pipeline. Read the latest documentation:
most recent commit 5 months ago
Fedbiomed ⭐ 28
A collaborative learning framework for empowering biomedical research
most recent commit 3 months ago
Ctakes ⭐ 28
Apache cTAKES is a Natural Language Processing (NLP) platform for clinical text.
most recent commit 3 months ago
Ci4cc Informatics Resources ⭐ 23
Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are developing.
most recent commit 6 years ago
Spl_ud_dl ⭐ 23
A reported 96,480 people were diagnosed with melanoma in the United States in 2019, leading to 7230 reported deaths. Early-stage identification of suspicious pigmented lesions (SPLs) in primary care settings can lead to im- proved melanoma prognosis and a possible 20-fold reduction in treatment cost. Despite this clinical and economic value, efficient tools for SPL detection are mostly absent. To bridge this gap, we developed an SPL analysis system for wide-field images using deep convolutional
most recent commit 2 years ago
Medkey ⭐ 18
Medkey Hospital Information System main repository: Practice Management for Practicioners & Hospitals, EHR, Patient Engagement
most recent commit 4 years ago
Jailbreak ⭐ 16
We jailbreak your medical records and genomics data. For free.
most recent commit 3 years ago
Tracespipe ⭐ 16
Reconstruction and analysis of viral and host genomes at multi-organ level
most recent commit 10 months ago
Ai Deadlines ⭐ 15
most recent commit 6 months ago
Ai 4 Clinical Workflow ⭐ 14
Integrating AI to Clinical Workflow
most recent commit 2 years ago
Opendatacapture ⭐ 14
An open-source, user-friendly web application for electronic data capture
most recent commit 4 months ago
Rbest ⭐ 12
Tool-set to support Bayesian evidence synthesis in R
most recent commit 4 months ago
Jovian ⭐ 12
Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical biologists and wet-lab personnel to do metagenomics/viromics analyses themselves, without bioinformatics expertise.
most recent commit 3 years ago
Seave ⭐ 12
Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores genomic variation of all types and sizes, and allows filtering for specific inheritance patterns, quality values, allele frequencies and gene lists. Seave is open source and deployable locally, or on a cloud computing provider, and works readily with gene panel, exome and whole genome data, scaling fr
most recent commit 6 years ago
Lm Biomedical Clinical Es ⭐ 12
Official source for Spanish pretrained biomedical and clinical language models and resources made @ BSC-TEMU within the "Plan de las Tecnologías del Lenguaje" (Plan-TL).
most recent commit a year ago
Yarn ⭐ 10
Disambiguating biomedical and clinical concepts with word embeddings
most recent commit 6 years ago
Cohorts ⭐ 7
A python package for standardized and reproducible processing, analysis, and integration of clinical proteomics data
most recent commit 9 months ago
The 3 Latest Releases In Clinical Open Source Projects
Ehrbase ⭐ 195
An open source openEHR server
dependent packages 3total releases 21latest release September 27, 2023most recent commit 3 months ago
Torchmimic ⭐ 6
PyTorch library for MIMIC III Benchmark experiments
total releases 4latest release June 27, 2022most recent commit 5 months ago
Charger ⭐ 70
Characterization of Germline variants
total releases 4latest release January 11, 2018most recent commit 3 years ago
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