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The Top 23 Cancer Research Open Source Projects

Open source projects categorized as Cancer Research
Categories > Cancer Research
Survival Analysis Using Deep Learning ⭐ 138
This repository contains morden baysian statistics and deep learning based research articles , software for survival analysis
most recent commit 3 years ago
Sigminer ⭐ 119
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/
total releases 32most recent commit 4 months ago
Chaste ⭐ 115
Chaste - Cancer Heart And Soft Tissue Environment - main public repository.
most recent commit 3 months ago
Physicell ⭐ 107
PhysiCell: Scientist end users should use latest release! Developers please fork the development branch and submit PRs to the dev branch. Thanks!
most recent commit 9 months ago
Toad ⭐ 94
AI-based pathology predicts origins for cancers of unknown primary - Nature
most recent commit 2 years ago
Deep Histopath ⭐ 92
A deep learning approach to predicting breast tumor proliferation scores for the TUPAC16 challenge
most recent commit 5 years ago
Digipathai ⭐ 56
Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
total releases 14most recent commit 7 months ago
Palimpsest ⭐ 56
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
most recent commit 3 years ago
Cpsr ⭐ 50
Cancer Predisposition Sequencing Reporter (CPSR)
most recent commit 9 months ago
Cancer Whitepaper ⭐ 46
Cancer Whitepaper
most recent commit a year ago
Cfdnapro ⭐ 20
cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis
most recent commit 7 months ago
Cancer_data ⭐ 11
A unified downloader+preprocessor for cancer genomics datasets
total releases 12most recent commit a year ago
Meta ⭐ 11
📎 About MIMBCD-UI Project
most recent commit a year ago
Cansig ⭐ 10
Discovering de novo shared transcriptional programs in single cancer cells
total releases 8most recent commit 9 months ago
Phenoncox ⭐ 8
Crossmapped phenotype ontologies for the oncology domain
most recent commit 3 months ago
Htan Portal ⭐ 8
The HTAN Data Portal
most recent commit 3 months ago
Meta ⭐ 7
📎 About MIDA Project
most recent commit 3 years ago
Curatedpcadata ⭐ 7
Curated Prostate Cancer Data R-package
most recent commit 6 months ago
Cll Chromatin ⭐ 7
Data analysis scripts for Rendeiro et. al, 2016 (doi:10.1038/ncomms11938)
most recent commit 6 years ago
Bm Gbm ⭐ 6
Some accessible radiomics datas were provided in this link.
most recent commit 2 years ago
Geneoncox ⭐ 6
Human gene annotations for the oncology domain
most recent commit 3 months ago
Vidente ⭐ 6
R package to parse and preprocess the Surveillance, Epidemiology, and End Results (SEER) Program data from NIH/NCI
most recent commit 5 years ago
Sith ⭐ 5
An R package for visualizing and analyzing a spatial model of intratumor heterogeneity
total releases 2most recent commit a year ago
The 5 Latest Releases In Cancer Research Open Source Projects
Cansig ⭐ 10
Discovering de novo shared transcriptional programs in single cancer cells
total releases 8latest release June 13, 2022most recent commit 9 months ago
Cancer_data ⭐ 11
A unified downloader+preprocessor for cancer genomics datasets
total releases 12latest release January 08, 2022most recent commit a year ago
Sith ⭐ 5
An R package for visualizing and analyzing a spatial model of intratumor heterogeneity
total releases 2latest release July 02, 2020most recent commit a year ago
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