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The Top 4 R Cancer Genomics Mutational Signatures Open Source Projects

Open source projects categorized as R Cancer Genomics Mutational Signatures
Categories > Science > Cancer Genomics
Categories > Mutational Signatures
Palimpsest ⭐ 56
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
most recent commit 3 years ago
Sigprofilermatrixgeneratorr ⭐ 17
R wrapper for utilizing the SigProfilerMatrixGenerator framework
most recent commit a year ago
Sigprofilerextractorr ⭐ 11
An R wrapper for SigProfilerExtractor that allows de novo extraction of mutational signatures from data generated in a matrix format. The tool identifies the number of operative mutational signatures, their activities in each sample, and the probability for each signature to cause a specific mutation type in a cancer sample. The tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
most recent commit a year ago
Pc_cna_signature ⭐ 8
Prostate Cancer Alteration Signature Analysis
most recent commit 3 years ago
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